PDBsum entry 1j4t Go to PDB code:  Pore analysis for: 1j4t calculated with MOLE 2.0 PDB id 1j4t Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.29 62.4 -1.60 -0.56 13.2 80 4 3 5 0 4 2 0  AYA 1 A 2 1.24 1.32 64.4 0.38 -0.20 4.3 89 1 3 10 6 2 1 0  AYA 1 B 3 1.14 1.57 30.0 -0.01 -0.48 4.2 93 1 1 8 4 0 1 0  AYA 1 F 4 1.17 1.32 55.2 0.62 -0.09 2.9 88 1 1 8 7 2 1 0  AYA 1 H 5 1.17 1.34 58.6 -0.36 -0.44 5.6 91 2 2 6 2 2 2 0  AYA 1 F AYA 1 H 6 1.16 1.33 70.8 0.25 -0.27 3.9 91 2 3 11 6 2 1 0  AYA 1 H Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.