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PDBsum entry 1j4t
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Tunnel analysis for: 1j4t calculated with  MOLE 2.0
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PDB id
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1j4t
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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11 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
2.99 |
28.3 |
0.60 |
0.54 |
1.7 |
73 |
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0 |
0 |
1 |
4 |
6 |
0 |
0 |
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2 |
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1.19 |
1.27 |
32.5 |
0.53 |
0.47 |
2.1 |
68 |
1 |
0 |
1 |
4 |
8 |
1 |
0 |
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3 |
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1.27 |
1.35 |
15.8 |
1.32 |
0.21 |
2.5 |
73 |
0 |
1 |
0 |
4 |
1 |
0 |
0 |
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4 |
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1.10 |
1.39 |
16.2 |
1.58 |
0.48 |
1.5 |
68 |
0 |
0 |
3 |
2 |
2 |
0 |
0 |
AYA 1 F
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5 |
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1.91 |
1.97 |
16.5 |
1.75 |
0.50 |
1.4 |
71 |
0 |
0 |
3 |
4 |
2 |
0 |
0 |
AYA 1 F
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6 |
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2.03 |
2.10 |
16.9 |
1.86 |
0.56 |
1.4 |
71 |
0 |
0 |
3 |
4 |
2 |
0 |
0 |
AYA 1 F
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program