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PDBsum entry 1erj

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 1erj calculated with MOLE 2.0 PDB id
1erj
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.84 4.10 40.1 -1.83 -0.57 15.1 79 2 7 5 1 3 0 0  
2 1.18 1.27 53.0 -1.50 -0.56 14.6 92 4 3 8 3 1 1 0  
3 2.53 2.70 54.0 -1.64 -0.59 18.3 91 5 4 6 3 1 1 0  
4 2.44 2.44 56.7 -1.78 -0.56 16.0 85 4 4 8 2 4 1 0  
5 2.48 2.42 58.8 -1.71 -0.58 15.4 90 5 4 10 2 2 1 0  
6 1.81 1.80 73.3 -1.28 -0.47 13.6 84 5 6 9 3 3 4 0  
7 1.16 1.30 115.2 -0.54 -0.29 10.7 78 6 5 6 11 5 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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