PDBsum entry 1erj Go to PDB code:  Tunnel analysis for: 1erj calculated with MOLE 2.0 PDB id 1erj Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.36 23.2 -0.74 -0.05 6.7 75 2 0 2 2 2 4 0   2 1.33 1.35 26.4 -0.64 -0.05 7.2 71 3 0 2 2 3 5 0   3 1.41 2.36 15.3 0.67 0.26 4.7 64 1 0 0 4 2 0 0   4 1.21 1.34 17.0 1.15 0.81 7.9 81 2 0 1 6 1 0 0   5 1.30 1.63 15.3 0.52 0.08 11.3 90 2 1 1 3 0 0 0   6 1.34 1.88 15.9 -0.22 -0.06 16.6 90 2 1 1 3 0 0 0   7 1.19 1.39 15.9 1.50 0.94 5.3 81 1 0 1 6 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.