PDBsum entry 1dyn Go to PDB code:  Tunnel analysis for: 1dyn calculated with MOLE 2.0 PDB id 1dyn Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.52 17.2 -2.26 -0.31 29.2 72 2 3 1 2 2 0 0   2 1.26 1.36 15.1 -1.98 -0.78 25.8 68 4 3 0 0 1 0 0   3 1.10 1.51 19.2 -2.46 -0.60 35.5 73 2 4 0 1 1 0 0   4 1.22 4.29 16.1 -1.13 0.64 20.0 70 2 1 0 3 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.