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PDBsum entry 1c5d
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Pore analysis for: 1c5d calculated with  MOLE 2.0
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PDB id
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1c5d
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.57 |
2.74 |
25.5 |
-1.56 |
-0.36 |
21.5 |
84 |
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3 |
3 |
3 |
3 |
2 |
0 |
0 |
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2 |
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2.05 |
2.05 |
32.3 |
-0.37 |
-0.33 |
4.3 |
77 |
0 |
1 |
0 |
3 |
0 |
6 |
0 |
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3 |
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2.11 |
2.39 |
33.1 |
-0.99 |
-0.53 |
15.2 |
91 |
3 |
4 |
5 |
3 |
1 |
0 |
0 |
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4 |
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2.02 |
2.02 |
35.2 |
-0.64 |
-0.50 |
5.0 |
79 |
1 |
1 |
0 |
2 |
0 |
5 |
0 |
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5 |
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3.09 |
3.12 |
42.1 |
-1.23 |
-0.51 |
14.0 |
73 |
4 |
2 |
0 |
2 |
0 |
4 |
0 |
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6 |
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1.03 |
1.18 |
66.5 |
-1.07 |
-0.25 |
14.4 |
80 |
4 |
2 |
1 |
4 |
1 |
3 |
0 |
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7 |
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1.08 |
1.17 |
68.8 |
-0.94 |
-0.27 |
9.6 |
80 |
3 |
1 |
0 |
5 |
1 |
4 |
0 |
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8 |
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2.52 |
2.52 |
34.1 |
-0.53 |
-0.45 |
5.4 |
81 |
0 |
1 |
2 |
2 |
0 |
5 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program