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PDBsum entry 4c2d
Go to PDB code:
Ligand/metal interactions
PDB id
4c2d
Ligand highlighted
ALA-ALA-PRO-GLN-
ALA
Ligands
ALA-ALA-SER-LEU-
SER-ALA
×3
ALA 1(E) to ALA 6(E)
SER-LEU-SER-ALA
SER 3(H) to ALA 6(H)
ALA-ALA-PRO-GLN-
ALA
ALA 1(M) to ALA 5(M)
PRO-GLN-THR-ALA
×2
PRO 2(N) to ALA 5(N)
PRO 2(O) to ALA 5(O)
GLN-THR-ALA
GLN 3(P) to ALA 5(P)
Ligand
ALA-ALA-PRO-GLN-ALA
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ALA 1(M)
6
-
-
-
Residue too small to validate
ALA 2(M)
6
-
-
-
Residue too small to validate
PRO 3(M)
8
8
1
1
Complete
Chiral checks - OK
GLN 4(M)
10
10
1
1
Complete
Chiral checks - OK
ALA 5(M)
6
-
-
-
Residue too small to validate
Advanced Analysis
Residue
Name Mismatches
Count
ALA 1(M)
-
0
ALA 2(M)
-
0
PRO 3(M)
-
0
GLN 4(M)
O: OXT
1
ALA 5(M)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
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3D Viewers:
LIGPLOT
of interactions involving ligand ALA-ALA-PRO-GLN-ALA
List of
interactions
ALA 1(M) to ALA 5(M)
