PDBsum entry 4c2d Go to PDB code:  Tunnel analysis for: 4c2d calculated with MOLE 2.0 PDB id 4c2d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.76 17.0 -0.21 0.13 14.7 79 1 2 0 4 1 0 0   2 1.22 1.41 24.1 2.60 0.71 0.6 81 0 0 0 10 0 1 0   3 1.21 3.02 24.2 2.73 0.80 0.6 71 0 0 0 7 2 0 0   4 1.52 3.13 19.3 -1.53 -0.08 23.4 72 3 2 0 1 4 1 0   5 1.64 1.83 15.5 -1.46 -0.13 10.6 84 1 0 1 1 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.