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PDBsum entry 1ldp
Go to PDB code:
Ligand/metal interactions
PDB id
1ldp
Ligand highlighted
NAG-NDG
Ligands
ALA-PRO-ALA-ALA-
ALA-ALA-ALA-ALA-
MET
ALA 1(P) to MET 9(P)
GLN-LEU-SER-PRO-
PHE-PRO-PHE-ASP-
LEU
GLN 1(Q) to LEU 9(Q)
NAG-NDG
NAG 1(A) to NDG 2(A)
NAG
NAG 273(H)
Ligand
NAG-NDG
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
NDG
-
2-Acetamido-2-Deoxy-Alpha-D-Glucopyranose [N-Acetyl-Alpha-D-Glucosamine; 2-Acetamido-2-Deoxy- Alpha-D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2- Acetamido-2-Deoxy-Glucose; 2-(Acetylamino)-2-Deoxy-A- D-Glucopyranose]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(A)
15
15
1
1
0
0
0
0
1
0
NDG 2(A)
15
15
1
0
0
0
0
0
0
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NDG
List of
interactions
NAG 1(A) to NDG 2(A)
