PDBsum entry 1ldp Go to PDB code:  Tunnel analysis for: 1ldp calculated with MOLE 2.0 PDB id 1ldp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 1.56 20.0 0.37 0.23 10.8 84 3 0 1 5 3 1 0   2 1.47 1.55 21.6 0.53 0.23 9.9 83 3 0 1 5 3 1 0   3 1.30 1.51 24.1 -0.79 0.00 10.2 73 1 2 1 4 5 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.