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PDBsum entry 5tmc
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Ligand/metal interactions
PDB id
5tmc
Ligand highlighted
G4P
Ligands
PO4
PO4 401(A)
G4P
G4P 1605(D)
Metals
_MG
×4
MG 1201(C)
MG 1606(D)
MG 1601(D)
MG 1604(D)
_ZN
×2
ZN 1602(D)
ZN 1603(D)
Ligand
G4P
-
Guanosine-5',3'-Tetraphosphate
[Guanosine tetraphosphate;ppgpp]
Formula:
C
10
H
17
N
5
O
17
P
4
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
G4P 1605(D)
36
36
0
0
0
0
0
1
0
0
Advanced Analysis
Residue
Name Mismatches
Count
G4P 1605(D)
O2B: O1B
|
O1B: O3B
|
O2A: O1A
|
O1A: O2A
4
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand G4P
List of
interactions
G4P 1605(D)
_MG
×4
_ZN
×2
