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PDBsum entry 5nif
Go to PDB code:
Ligand/metal interactions
PDB id
5nif
16 instances of ligand highlighted
EDO
Ligands
TRP-ARG-SER-TYR-
TYR-ALA
×2
TRP 9(3) to ALA 14(3)
EDO
×16
EDO 302(C)
EDO 301(F)
EDO 301(G)
EDO 302(I)
EDO 302(L)
EDO 302(M)
EDO 302(O)
EDO 303(O)
EDO 303(W)
EDO 201(Y)
EDO 202(Y)
EDO 302(1)
EDO 304(2)
GOL
×7
GOL 201(J)
GOL 301(L)
GOL 301(M)
GOL 301(Q)
GOL 202(V)
GOL 301(1)
Metals
_CL
×12
CL 301(A)
CL 202(K)
CL 301(P)
CL 301(R)
CL 301(S)
CL 201(K)
CL 301(N)
CL 301(O)
CL 201(V)
CL 301(2)
CL 302(2)
CL 303(2)
_MG
×8
MG 301(D)
MG 201(H)
MG 202(J)
MG 303(N)
MG 302(Q)
MG 301(C)
MG 301(I)
MG 302(N)
Ligand
EDO
-
1,2-Ethanediol
[Ethylene glycol]
Formula:
C
2
H
6
O
2
Validation of ligand annotation
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
Residues with less than 7 heavy atoms are not validated.
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3D Viewers:
LIGPLOT
of interactions involving ligand EDO
List of
interactions
EDO 302(C)
_CL
×12
