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PDBsum entry 4ect
Go to PDB code:
Ligand/metal interactions
PDB id
4ect
Ligand highlighted
DTP-DPO
Ligands
GOL
×3
GOL 507(A)
GOL 508(A)
GOL 509(A)
DTP-DPO
DTP 504(P) to DPO 505(P)
Metals
_MG
×3
MG 506(P)
MG 501(A)
MG 503(A)
_CA
CA 502(A)
Ligand
DTP-DPO
DTP
-
2'-Deoxyadenosine 5'-Triphosphate
Formula:
C
10
H
16
N
5
O
12
P
3
DPO
-
Diphosphate
Formula:
O
7
P
2
4
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
DPO 505(P)
9
9
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
DPO 505(P)
P2: P1
|
O5: O1
|
O6: O2
|
O7: O3
|
P1: P2...
8
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Het Group DPO corresponds to this enzyme's product diphosphate
LIGPLOT
of interactions involving ligand DTP-DPO
List of
interactions
DTP 504(P) to DPO 505(P)
_MG
×3
_CA
