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PDBsum entry 1vzx
Go to PDB code:
Ligand/metal interactions
PDB id
1vzx
2 instances of ligand highlighted
NAG-GAL
Ligands
NAG-GAL
×2
NAG 1(C) to GAL 2(C)
NAG 1(D) to GAL 2(D)
UDP
×2
UDP 1372(A)
UDP 2372(B)
GOL
×2
GOL 1373(A)
GOL 2373(B)
Metals
_MN
×2
MN 1371(A)
MN 2371(B)
Ligand
NAG-GAL
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
GAL
-
Beta-D-Galactopyranose [Beta-D-Galactose; d-Galactose; galactose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(D)
15
15
0
0
Complete
Chiral checks - OK
GAL 2(D)
12
12
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-GAL
List of
interactions
NAG 1(D) to GAL 2(D)
_MN
×2
