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PDBsum entry 1m6b
Go to PDB code:
Ligand/metal interactions
PDB id
1m6b
2 instances of ligand highlighted
NAG-NAG
Ligands
NAG-NAG
×2
NAG 1(C) to NAG 2(C)
NAG 1(D) to NAG 2(D)
NAG
×13
NAG 622(A)
NAG 623(A)
NAG 626(A)
NAG 627(A)
NAG 628(A)
NAG 629(A)
NAG 630(A)
NAG 622(B)
NAG 623(B)
NAG 626(B)
NAG 627(B)
NAG 628(B)
NAG 629(B)
SO4
SO4 5001(B)
Ligand
NAG-NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(D)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(D)
15
15
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG
List of
interactions
NAG 1(D) to NAG 2(D)
