PDBsum entry 1m6b Go to PDB code:  Tunnel analysis for: 1m6b calculated with MOLE 2.0 PDB id 1m6b Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.23 27.3 -0.53 -0.56 6.7 86 1 2 4 4 0 0 1   2 1.12 1.22 47.1 -0.93 -0.44 12.4 80 2 2 3 3 2 2 1   3 1.17 1.25 69.8 -1.50 -0.58 15.6 87 5 4 5 4 0 1 1  NAG 622 A 4 2.44 2.44 15.3 -1.20 -0.58 7.3 73 2 0 1 2 0 2 0   5 1.09 2.01 26.3 -2.27 -0.69 19.9 100 2 0 3 0 0 0 0  NAG 626 A 6 1.10 3.31 28.7 3.57 1.17 0.4 70 0 0 0 15 2 0 2   7 1.36 2.46 16.3 0.51 0.44 1.5 75 0 0 1 3 1 3 0   8 1.16 1.25 17.6 0.40 0.38 7.5 68 1 0 1 4 2 0 0   9 1.71 1.81 21.5 -0.59 -0.38 13.4 102 1 0 1 1 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.