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PDBsum entry 5c1d
Go to PDB code:
Ligand/metal interactions
PDB id
5c1d
Ligand highlighted
VAL-THR-PRO-VAL-
SER-THR-ALA-ALA
Ligands
VAL-THR-PRO-VAL-
SER-THR-ALA-ALA
VAL 1(C) to ALA 8(C)
12V
12V 1101(A)
PO4
×2
PO4 1102(A)
PO4 1103(A)
Ligand
VAL-THR-PRO-VAL-SER-THR-ALA-ALA
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
VAL 1(C)
8
8
1
1
Complete
Chiral checks - OK
THR 2(C)
8
8
1
1
Complete
Chiral checks - OK
PRO 3(C)
8
8
1
1
Complete
Chiral checks - OK
VAL 4(C)
8
8
1
1
Complete
Chiral checks - OK
SER 5(C)
7
7
1
1
Complete
Chiral checks - OK
THR 6(C)
8
8
1
1
Complete
Chiral checks - OK
ALA 7(C)
6
-
-
-
Residue too small to validate
ALA 8(C)
6
-
-
-
Residue too small to validate
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand VAL-THR-PRO-VAL-SER-THR-ALA-ALA
List of
interactions
VAL 1(C) to ALA 8(C)
