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PDBsum entry 4j86
Go to PDB code:
Ligand/metal interactions
PDB id
4j86
2 instances of ligand highlighted
THR-PHE-LYS-LYS-
THR-ASN
Ligands
THR-PHE-LYS-LYS-
THR-ASN
×2
THR 1(C) to ASN 6(C)
Ligand
THR-PHE-LYS-LYS-THR-ASN
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
THR 1(C)
8
8
1
1
Complete
Chiral checks - OK
PHE 2(C)
12
12
1
1
Complete
Chiral checks - OK
LYS 3(C)
10
10
1
1
Complete
Chiral checks - OK
LYS 4(C)
10
10
1
1
Complete
Chiral checks - OK
THR 5(C)
8
8
1
1
Complete
Chiral checks - OK
ASN 6(C)
9
9
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
THR 1(C)
-
0
PHE 2(C)
O: OXT
1
LYS 3(C)
-
0
LYS 4(C)
O: OXT
1
THR 5(C)
-
0
ASN 6(C)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
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3D Viewers:
LIGPLOT
of interactions involving ligand THR-PHE-LYS-LYS-THR-ASN
List of
interactions
THR 1(C) to ASN 6(C)
(also representing equivalent ligand THR 1(D) to ASN 6(D) )
