Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
PDBsum entry 3t3m
Go to PDB code:
Ligand/metal interactions
PDB id
3t3m
Ligand highlighted
NAG-NAG-BMA-MAN-
MAN
Ligands
NAG-NAG-BMA-MAN-
MAN
NAG 1(G) to MAN 5(G)
NAG-NAG
×2
NAG 1(I) to NAG 2(I)
NAG-NAG-BMA-MAN
NAG 1(J) to MAN 4(J)
RC2
×2
RC2 5000(A)
SO4
×4
SO4 458(A)
SO4 459(A)
SO4 460(A)
SO4 215(L)
NAG
×2
NAG 3099(B)
Metals
_CL
×3
CL 473(B)
CL 458(C)
_CA
×12
CA 2004(A)
CA 2005(A)
CA 2006(A)
CA 2007(A)
CA 2002(B)
CA 2003(B)
Ligand
NAG-NAG-BMA-MAN-MAN
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
BMA
-
Beta-D-Mannopyranose [Beta-D-Mannose; d-Mannose; mannose]
Formula:
C
6
H
12
O
6
MAN
-
Alpha-D-Mannopyranose [Alpha-D-Mannose; d-Mannose; mannose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(G)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(G)
15
15
1
0
Complete
Chiral checks - OK
BMA 3(G)
12
12
1
0
Complete
Chiral checks - OK
MAN 4(G)
12
12
1
0
Complete
Chiral checks - OK
MAN 5(G)
12
12
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
Use mouse to move/zoom
3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG-BMA-MAN-MAN
List of
interactions
NAG 1(G) to MAN 5(G)
_CL
×3
_CA
×12
