PDBsum entry 3pma

Ligand/metal interactions

PDB id

3pma


	2 instances of ligand highlighted
	GU4-YYJ

Ligands

GU4-YYJ ×2

GU4 1(E) to YYJ 2(E)

GU4 1(F) to YYJ 2(F)

CIT ×2

CIT 3(B)

CIT 4(D)

Metals

_NA ×2

NA 1(B)

NA 2(D)

Ligand GU4-YYJ

GU4 - 2,3,4,6-Tetra-O-Sulfonato-Alpha-D-Glucopyranose [2,3,4,6-Tetra-O-Sulfonato-Alpha-D-Glucose; 2,3,4,6- Tetra-O-Sulfonato-D-Glucose; 2,3,4,6-Tetra-O- Sulfonato-Glucose] Formula: C₆H₁₂O₁₈S₄

YYJ - 1,3,4,6-Tetra-O-Sulfo-Beta-D-Fructofuranose Formula: C₆H₁₂O₁₈S₄

Validation of ligand annotation

Per Residue Validation

	Atoms				Missing		Incorrect Chiral Centres
Residue	Dic.	Struc.	Link	Subs.	Atoms	Rings	Planar	High	C	Other
GU4 1(E)	28	28	1	0	Complete		Chiral checks - OK
YYJ 2(E)	28	28	0	0	Complete		Chiral checks - OK

Advanced Analysis

Residue	Name Mismatches	Count
GU4 1(E)	O27: O28\|O29: O27\|O10: O12\|O11: O10	4
YYJ 2(E)	O3S3: O1S3\|O3S4: O1S4\|O3S6: O1S6\|O3S1: O2S1\|O1S3: O2S3...	10

Additional Information

Validation carried out using MotiveValidator. Full validation report can be found in Validator^DB.

Use mouse to move/zoom
3D Viewers:

LIGPLOT of interactions involving ligand GU4-YYJ

List of
interactions

GU4 1(E) to YYJ 2(E)