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PDBsum entry 3pma

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3pma calculated with MOLE 2.0 PDB id
3pma
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.33 1.33 30.5 -0.85 -0.64 12.5 82 4 5 1 2 2 0 0  NA 2 D
2 1.41 1.41 33.9 -1.10 -0.65 16.1 79 4 5 1 2 2 2 1  NA 1 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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