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PDBsum entry 2zvm
Go to PDB code:
Ligand/metal interactions
PDB id
2zvm
Ligand highlighted
LYS-LYS-GLY-LEU-
ILE-ASP-TYR-TYR-
LEU-MET
Ligands
LYS-LYS-GLY-LEU-
ILE-ASP-TYR-TYR-
LEU-MET
LYS 420(V) to MET 429(V)
LYS-GLY-LEU-ILE-
ASP-TYR-TYR-LEU-
MET
LYS 421(W) to MET 429(W)
Ligand
LYS-LYS-GLY-LEU-ILE-ASP-TYR-TYR-LEU-MET
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
LYS 420(V)
10
10
1
1
0
0
0
0
0
0
LYS 421(V)
10
10
1
1
0
0
0
0
0
0
GLY 422(V)
5
-
-
-
-
-
-
-
-
-
LEU 423(V)
9
9
1
1
0
0
0
0
0
0
ILE 424(V)
9
9
1
1
0
0
0
0
0
0
ASP 425(V)
9
9
1
1
0
0
0
0
0
0
TYR 426(V)
13
13
1
1
0
0
0
0
0
0
TYR 427(V)
13
13
1
1
0
0
0
0
0
0
LEU 428(V)
9
9
1
1
0
0
0
0
0
0
MET 429(V)
9
8
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
LYS 420(V)
-
0
LYS 421(V)
O: OXT
1
GLY 422(V)
-
0
LEU 423(V)
O: OXT
1
ILE 424(V)
-
0
ASP 425(V)
OD2: OD1
|
OD1: OD2
2
TYR 426(V)
-
0
TYR 427(V)
-
0
LEU 428(V)
O: OXT
1
MET 429(V)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand LYS-LYS-GLY-LEU-ILE-ASP-TYR-TYR-LEU-MET
List of
interactions
LYS 420(V) to MET 429(V)
