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PDBsum entry 2zvm

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2zvm calculated with MOLE 2.0 PDB id
2zvm
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.22 1.41 15.4 0.80 0.10 8.7 74 1 1 0 3 1 0 1  
2 1.22 1.54 19.5 0.63 0.75 4.8 71 1 1 3 4 3 2 0  
3 1.14 2.31 22.5 0.29 -0.05 7.7 79 1 2 2 6 1 0 0  
4 1.15 2.73 24.7 0.56 -0.08 3.4 80 0 1 3 6 1 0 1  
5 1.34 1.34 15.7 0.18 0.44 4.6 69 0 1 1 4 2 2 0  
6 1.45 1.81 19.0 -1.94 -0.57 26.6 83 2 3 1 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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