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PDBsum entry 2vqd
Go to PDB code:
Ligand/metal interactions
PDB id
2vqd
Ligand highlighted
AP2
Ligands
AP2
AP2 1448(A)
SO4
SO4 1450(A)
Metals
_MG
MG 1449(A)
Ligand
AP2
-
Phosphomethylphosphonic acid adenosyl ester
Formula:
C
11
H
17
N
5
O
9
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
AP2 1448(A)
27
27
0
0
0
0
0
1
0
0
Advanced Analysis
Residue
Name Mismatches
Count
AP2 1448(A)
O3B: O1B
|
O1B: O2B
|
O2A: O1A
|
O1A: O2A
4
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's product ADP with similarity 68.75%
LIGPLOT
of interactions involving ligand AP2
List of
interactions
AP2 1448(A)
_MG
