PDBsum entry 2vqd Go to PDB code:  Tunnel analysis for: 2vqd calculated with MOLE 2.0 PDB id 2vqd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.05 1.40 38.3 -0.95 -0.48 16.5 69 3 4 1 2 4 1 0  SO4 1450 A 2 1.07 1.40 55.3 -1.10 -0.52 18.5 77 5 4 0 4 3 0 0  SO4 1450 A 3 1.41 1.54 22.5 -0.21 -0.03 12.0 87 2 2 3 4 1 1 0   4 1.46 1.46 20.3 -0.26 -0.34 7.7 88 2 0 0 5 0 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.