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PDBsum entry 1lp9
Go to PDB code:
Ligand/metal interactions
PDB id
1lp9
2 instances of ligand highlighted
ALA-LEU-TRP-GLY-
PHE-PHE-PRO-VAL-
LEU
Ligands
ALA-LEU-TRP-GLY-
PHE-PHE-PRO-VAL-
LEU
×2
ALA 1(C) to LEU 9(C)
Ligand
ALA-LEU-TRP-GLY-PHE-PHE-PRO-VAL-LEU
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ALA 1(C)
6
-
-
-
Residue too small to validate
LEU 2(C)
9
9
1
1
Complete
Chiral checks - OK
TRP 3(C)
15
15
1
1
Complete
Chiral checks - OK
GLY 4(C)
5
-
-
-
Residue too small to validate
PHE 5(C)
12
12
1
1
Complete
Chiral checks - OK
PHE 6(C)
12
12
1
1
Complete
Chiral checks - OK
PRO 7(C)
8
8
1
1
Complete
Chiral checks - OK
VAL 8(C)
8
8
1
1
Complete
Chiral checks - OK
LEU 9(C)
9
9
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
ALA 1(C)
-
0
LEU 2(C)
O: OXT
1
TRP 3(C)
O: OXT
1
GLY 4(C)
-
0
PHE 5(C)
-
0
PHE 6(C)
O: OXT
1
PRO 7(C)
-
0
VAL 8(C)
-
0
LEU 9(C)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
MotiveValidator
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Validator
DB
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3D Viewers:
LIGPLOT
of interactions involving ligand ALA-LEU-TRP-GLY-PHE-PHE-PRO-VAL-LEU
List of
interactions
ALA 1(C) to LEU 9(C)
(also representing equivalent ligand ALA 1(J) to LEU 9(J) )
