spacer
spacer

PDBsum entry 5faq

Go to PDB code: 
protein ligands metals Protein-protein interface(s) links
Hydrolase/hydrolase inhibitor PDB id
5faq

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
241 a.a.
Ligands
5VW ×2
Metals
_CO ×6
_CD ×3
_CL
Waters ×424
PDB id:
5faq
Name: Hydrolase/hydrolase inhibitor
Title: Oxa-48 in complex with fpi-1465
Structure: Beta-lactamase. Chain: a, b. Engineered: yes
Source: Klebsiella pneumoniae. Organism_taxid: 573. Gene: bla oxa-48, blaoxa-48, kpe71t_00045. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.96Å     R-factor:   0.170     R-free:   0.210
Authors: A.M.King,D.T.King,S.French,E.Brouillette,A.Asli,A.N.Alexander, M.Vuckovic,S.N.Maiti,T.R.Parr,E.D.Brown,F.Malouin,N.C.J.Strynadka, G.D.Wright
Key ref: A.M.King et al. (2016). Structural and Kinetic Characterization of Diazabicyclooctanes as Dual Inhibitors of Both Serine-β-Lactamases and Penicillin-Binding Proteins. Acs Chem Biol, 11, 864-868. PubMed id: 26731698 DOI: 10.1021/acschembio.5b00944
Date:
11-Dec-15     Release date:   20-Jan-16    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q6XEC0  (Q6XEC0_KLEPN) -  Beta-lactamase from Klebsiella pneumoniae
Seq:
Struc:
265 a.a.
241 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.3.5.2.6  - beta-lactamase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Penicillin Biosynthesis and Metabolism
      Reaction: a beta-lactam + H2O = a substituted beta-amino acid
      Cofactor: Zn(2+)

 

 
DOI no: 10.1021/acschembio.5b00944 Acs Chem Biol 11:864-868 (2016)
PubMed id: 26731698  
 
 
Structural and Kinetic Characterization of Diazabicyclooctanes as Dual Inhibitors of Both Serine-β-Lactamases and Penicillin-Binding Proteins.
A.M.King, D.T.King, S.French, E.Brouillette, A.Asli, J.A.Alexander, M.Vuckovic, S.N.Maiti, T.R.Parr, E.D.Brown, F.Malouin, N.C.Strynadka, G.D.Wright.
 
  ABSTRACT  
 
Avibactam is a diazabicyclooctane β-lactamase inhibitor possessing outstanding but incomplete efficacy against multidrug-resistant Gram-negative pathogens in combination with β-lactam antibiotics. Significant pharmaceutical investment in generating derivatives of avibactam warrants a thorough characterization of their activity. We show here through structural and kinetic analysis that select diazabicyclooctane derivatives display effective but varied inhibition of two clinically important β-lactamases (CTX-M-15 and OXA-48). Furthermore, these derivatives exhibit considerable antimicrobial activity (MIC ≤ 2 μg/mL) against clinical isolates of Pseudomonas aeruginosa, Escherichia coli, and Enterobacter spp. Imaging of cell phenotype along with structural and biochemical experiments unambiguously demonstrate that this activity, in E. coli, is a result of targeting penicillin-binding protein 2. Our results suggest that structure-activity relationship studies for the purpose of drug discovery must consider both β-lactamases and penicillin-binding proteins as targets. We believe that this approach will yield next-generation combination or monotherapies with an expanded spectrum of activity against currently untreatable Gram-negative pathogens.
 

 

spacer

spacer