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PDBsum entry 4l7e

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protein ligands metals Protein-protein interface(s) links
Signaling protein PDB id
4l7e

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
187 a.a.
Ligands
PEG ×8
UNL ×2
Metals
_CL ×2
Waters ×106
PDB id:
4l7e
Name: Signaling protein
Title: Three dimensional structure of mutant d78a of human hd domain- containing protein 2, genomics consortium (nesg) target hr6723
Structure: Hd domain-containing protein 2. Chain: a, b. Synonym: hepatitis c virus ns5a-transactivated protein 2, hcv ns5a- transactivated protein 2. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: hddc2, c6orf74, ns5atp2, cgi-130. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
2.23Å     R-factor:   0.176     R-free:   0.215
Authors: A.Kuzin,M.Su,A.Yakunin,N.Beloglazova,J.Seetharaman,M.Maglaqui,R.Xiao, D.Lee,G.Brown,R.Flick,J.K.Everett,T.B.Acton,G.T.Montelione,J.F.Hunt, L.Tong,Northeast Structural Genomics Consortium (Nesg)
Key ref: A.Kuzin et al. Northeast structural genomics consortium target hr672. To be published, .
Date:
13-Jun-13     Release date:   24-Jul-13    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q7Z4H3  (HDDC2_HUMAN) -  5'-deoxynucleotidase HDDC2 from Homo sapiens
Seq:
Struc:
204 a.a.
187 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.3.1.3.89  - 5'-deoxynucleotidase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: a 2'-deoxyribonucleoside 5'-phosphate + H2O = a 2'-deoxyribonucleoside + phosphate
2'-deoxyribonucleoside 5'-phosphate
+ H2O
= 2'-deoxyribonucleoside
+ phosphate
      Cofactor: Cobalt cation
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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