spacer
spacer

PDBsum entry 4l7e

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4l7e calculated with MOLE 2.0 PDB id
4l7e
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
1 pore, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.55 1.64 41.9 -2.02 -0.43 25.0 78 4 3 2 1 0 0 0  PEG 304 A PEG 303 B
2 1.16 1.17 56.5 0.62 0.15 10.1 75 3 3 0 14 2 1 1  MSE 50 A MSE 53 A MSE 56 A MSE 79 A MSE 58 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer