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PDBsum entry 4e5o

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protein ligands Protein-protein interface(s) links
Transferase PDB id
4e5o

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
(+ 0 more) 287 a.a.
Ligands
UMP ×7
BU1 ×3
Waters ×1472
PDB id:
4e5o
Name: Transferase
Title: Crystal structure of mouse thymidylate synthase in complex with dump
Structure: Thymidylate synthase. Chain: a, b, c, d, e, f. Synonym: ts, tsase. Engineered: yes
Source: Mus musculus. Mouse. Organism_taxid: 10090. Gene: tyms. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.70Å     R-factor:   0.236     R-free:   0.292
Authors: A.Dowiercial,A.Jarmula,W.Rypniewski,M.Sokolowska,T.Fraczyk,J.Ciesla, W.Rode
Key ref: A.Dowiercial et al. (2009). Crystal structures of substrate- And sulfate-Bound mo thymidylate synthase. Pteridines, 20, 163.
Date:
14-Mar-12     Release date:   18-Apr-12    
Supersedes: 3ihh
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P07607  (TYSY_MOUSE) -  Thymidylate synthase from Mus musculus
Seq:
Struc:
307 a.a.
287 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.1.1.45  - thymidylate synthase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Folate Coenzymes
      Reaction: dUMP + (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate = 7,8-dihydrofolate + dTMP
dUMP
+ (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate
Bound ligand (Het Group name = UMP)
corresponds exactly
= 7,8-dihydrofolate
+ dTMP
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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