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PDBsum entry 2f7f

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protein ligands links
Transferase PDB id
2f7f

 

 

 

 

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Contents
Protein chain
482 a.a. *
Ligands
SO4 ×8
NIO ×2
DPO
GOL
Waters ×390
* Residue conservation analysis
PDB id:
2f7f
Name: Transferase
Title: Crystal structure of enterococcus faecalis putative nicotinate phosphoribosyltransferase, new york structural genomics consortium
Structure: Nicotinate phosphoribosyltransferase, putative. Chain: a. Engineered: yes
Source: Enterococcus faecalis. Organism_taxid: 226185. Strain: v583. Gene: ef2626. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Biol. unit: Tetramer (from PDB file)
Resolution:
2.00Å     R-factor:   0.172     R-free:   0.214
Authors: Y.Patskovsky,S.C.Almo,S.K.Burley,New York Sgx Research Center For Structural Genomics (Nysgxrc)
Key ref: Y.Patskovsky and s.c.almo Crystal structure of enterococcus faecalis nicotinate phosphoribosyltransferase. To be published, .
Date:
30-Nov-05     Release date:   13-Dec-05    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q830Y8  (Q830Y8_ENTFA) -  Nicotinate phosphoribosyltransferase from Enterococcus faecalis (strain ATCC 700802 / V583)
Seq:
Struc:
494 a.a.
482 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.6.3.4.21  - nicotinate phosphoribosyltransferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: nicotinate + 5-phospho-alpha-D-ribose 1-diphosphate + ATP + H2O = nicotinate beta-D-ribonucleotide + ADP + phosphate + diphosphate
nicotinate
+ 5-phospho-alpha-D-ribose 1-diphosphate
+ ATP
+ H2O
Bound ligand (Het Group name = NIO)
corresponds exactly
= nicotinate beta-D-ribonucleotide
+
ADP
Bound ligand (Het Group name = DPO)
corresponds exactly
+ phosphate
+ diphosphate
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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