PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam
 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View summary and phylogenies for PF06624 - RAMP4) |
FAM PF06624 PID RAMP4 DES Ribosome associated membrane protein RAMP4 IPR IPR010580 ANO 6 ALN 66 AID 0.480844 APH (((Q8SYY6_DROME/1-64:0.17375,Q9R2C1_RAT/10-74:0.22809):0.06657,(Q8MXH3_CAEEL/1-63:0.19223,Q93838_CAEEL/1-64:0.24110):0.15455):0.48385,Q8I655_PLAF7/1-64:0.53791,Q9FZK2_ARATH/10-74:0.47086); ATP (((Q8SYY6_DROME/1-64,Q9R2C1_RAT/10-74),(Q8MXH3_CAEEL/1-63,Q93838_CAEEL/1-64)),Q8I655_PLAF7/1-64,Q9FZK2_ARATH/10-74); ATL 2.5489 DNO 6 DLN 198 DID 0.534854 DPH (Q9R2C1_RAT/10-74:0.25795,Q8SYY6_DROME/1-64:0.26666,((Q8I655_PLAF7/1-64:0.43268,Q9FZK2_ARATH/10-74:0.33463):0.28699,(Q8MXH3_CAEEL/1-63:0.21001,Q93838_CAEEL/1-64:0.15667):0.14962):0.06260); DTP (Q9R2C1_RAT/10-74,Q8SYY6_DROME/1-64,((Q8I655_PLAF7/1-64,Q9FZK2_ARATH/10-74),(Q8MXH3_CAEEL/1-63,Q93838_CAEEL/1-64))); DTL 2.15781 RID 0.480844 RPH (((Q8SYY6_DROME/1-64:0.17375,Q9R2C1_RAT/10-74:0.22809):0.06657,(Q8MXH3_CAEEL/1-63:0.19223,Q93838_CAEEL/1-64:0.24110):0.15455):0.48385,Q8I655_PLAF7/1-64:0.53791,Q9FZK2_ARATH/10-74:0.47086); RTP (((Q8SYY6_DROME/1-64,Q9R2C1_RAT/10-74),(Q8MXH3_CAEEL/1-63,Q93838_CAEEL/1-64)),Q8I655_PLAF7/1-64,Q9FZK2_ARATH/10-74); RTL 2.5489 LNK Q8I655_PLAF7/1-64:Q8I655:AE001423 LNK Q8MXH3_CAEEL/1-63:Q8MXH3:AF047660 LNK Q8SYY6_DROME/1-64:Q8SYY6:AY071239 LNK Q93838_CAEEL/1-64:Q93838:Z81095 LNK Q9FZK2_ARATH/10-74:Q9FZK2:AC004557 LNK Q9R2C1_RAT/10-74:Q9R2C1:AJ238236 AMK xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx.xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx DMK xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx NAM Q9R2C1_RAT/10-74 ASQ MVAKQRIR-MANEKHSKNITQRGNVAKTSRNApEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG DSQ ATGGTCGCCAAGCAGAGGATCCGT---ATGGCCAACGAGAAGCACAGCAAGAACATAACTCAGCGCGGCAACGTCGCTAAGACCTCGAGAAATGCCcccGAAGAAAAGGCGTCGGTAGGACCCTGGTTATTGGCCCTCTTCATTTTTGTCGTTTGTGGATCTGCAATTTTCCAGATTATTCAAAGTATCAGGATGGGC TRN 10010101110011010 NAM Q8SYY6_DROME/1-64 ASQ MAPPQRMR-VANEKASKYVTMRGNVPKSSKTK.EGQYPVGPWLLALFIFVVCGSAIFQIVQSIRAA DSQ ATGGCTCCACCACAGAGAATGCGC---GTCGCTAACGAGAAGGCCAGCAAATATGTGACAATGCGTGGCAATGTACCCAAATCCTCGAAAACGAAA...GAGGGTCAATATCCGGTGGGTCCCTGGCTCCTGGCGCTGTTCATCTTTGTGGTCTGCGGCTCTGCCATTTTCCAGATTGTTCAGTCGATACGCGCCGCG TRN 10010101100011011 NAM Q93838_CAEEL/1-64 ASQ MAPKQRMT-LANKQFSKNVNNRGNVAKSLKPA.EDKYPAAPWLIGLFVFVVCGSAVFEIIRYVKMG DSQ ATGGCCCCAAAGCAACGTATGACA---CTTGCTAACAAGCAATTCTCCAAGAACGTGAACAACCGCGGAAATGTTGCCAAGAGCTTGAAGCCAGCC...GAGGACAAGTACCCAGCCGCCCCATGGCTCATCGGACTTTTCGTCTTTGTCGTCTGCGGATCCGCCGTCTTCGAGATCATCCGCTACGTCAAGATGGGA TRN 11011111111111111 NAM Q8MXH3_CAEEL/1-63 ASQ MAPKQRMA-VANAQFSKNVTQRGNVPKGNKTN.ESKFPTSQWLIGLFIFVVCGSAIFEVIRYIKV- DSQ ATGGCTCCAAAGCAGCGTATGGCC---GTCGCAAACGCGCAATTCAGCAAAAACGTCACTCAACGTGGAAATGTGCCGAAGGGAAATAAAACAAAC...GAATCGAAGTTTCCAACTTCCCAATGGCTCATTGGACTCTTCATCTTCGTTGTTTGTGGTTCCGCCATCTTCGAAGTCATCCGCTACATCAAAGTT--- TRN 11011101111011011 NAM Q9FZK2_ARATH/10-74 ASQ NTTSKRLADRKIEKFDKNILKRGFVPETTTKK.GKDYPVGPILLGFFVFVVIGSSLFQIIRTATSG DSQ AATACAACCTCAAAAAGACTAGCAGACAGGAAGATTGAGAAATTCGACAAGAACATATTGAAAAGAGGATTTGTTCCTGAGACCACCACCAAGAAG...GGTAAGGATTACCCTGTTGGTCCCATCCTCCTCGGCTTCTTTGTCTTTGTTGTCATTGGATCATCTCTCTTCCAGATCATCAGGACCGCAACTAGTGGA TRN 10010101110011001 NAM Q8I655_PLAF7/1-64 ASQ MPSNRKIT-QKVEAFDSNVTKRGNVPPSLVKK.GRKHPVGPILLVVFIFVVIGSVIVQMLSIIQKS DSQ ATGCCAAGTAACAGGAAAATAACA---CAAAAGGTTGAAGCCTTTGATAGTAACGTAACAAAGAGAGGCAATGTCCCTCCTTCTTTGGTAAAAAAA...GGAAGAAAGCATCCGGTAGGACCAATACTTCTTGTAGTCTTCATTTTTGTTGTTATAGGATCAGTTATTGTTCAAATGTTGAGTATTATACAAAAGTCT TRN 10010101110011001 //