pan•dit

PANDIT Protein and Associated NucleotideDomains with Inferred Trees

FAM  PF00575
PID  S1
DES  S1 RNA binding domain
IPR  IPR003029
ANO  55
ALN  91
AID  0.233192
APH  (((((RNE_PORPU/31-111:0.75584,RNG_ECOLI/34-121:0.55435):0.11771,RNE_ECOLI/35-119:0.59465):0.85782,(PNP_BACSU/618-690:0.45281,PNP_ECOLI/618-690:0.20985):0.06557):0.15461,YABR_BACSU/2-74:0.46186):0.26382,((((((IF1_BACSU/1-71:0.16590,IF1_MYCSP/20-90:0.80309):0.24155,(IF1C_PINTH/2-72:0.26311,IF1C_EPIVI/1-71:0.48695):0.00000):1.58634,(RNR_ECOLI/640-725:0.48434,RNR_MYCGE/640-725:0.79510):0.45164):0.34173,YHGF_ECOLI/647-720:0.41142):0.03360,(RS1_MYCLE/205-277:0.27137,((RS1_ECOLI/188-260:0.28183,(RS1_ECOLI/273-347:0.19130,RS1_RHIME/279-353:0.35485):0.33575):0.06884,(RS1_ECOLI/360-434:0.30368,RS1_RHIME/366-440:0.33066):0.67868):0.11568):0.12534):0.02972,RS1_MYCLE/290-363:0.56922):0.08895,((((((((RPB7_ARATH/78-160:0.37976,RPB7_RAT/78-161:0.25465):0.28610,RPB7_YEAST/80-161:0.88762):1.24544,((NUSA_BACSU/131-197:0.55122,NUSA_THETH/141-208:0.30126):0.17157,NUSA_ECOLI/131-198:0.76865):0.73995):0.30637,((RR1_PORPU/23-96:0.65674,(RS1_SYNP6/27-100:0.19830,RR1_SPIOL/92-166:1.20553):0.17175):0.50590,(RS1_MYCLE/32-105:0.33098,((RS1_RHIME/23-93:0.58362,RS1_ECOLI/17-87:0.47363):0.21919,RS1_CHLMU/48-116:0.26386):0.57198):0.20971):0.40109):0.04888,(RS1_ECOLI/447-520:0.28551,RS1_RHIME/455-530:0.97533):0.67227):0.03153,((((((RNB_ECOLI/557-636:0.88719,RNB_HAEIN/572-658:0.88106):1.13572,RS1H_BACSU/98-167:0.03043):0.37202,RS1_LEULA/140-210:0.57263):0.14898,(RS1_MYCLE/119-188:0.22952,(RS1_RHIME/107-177:0.53183,RS1_ECOLI/101-171:0.27615):0.42270):0.22999):0.43111,(RR1_PORPU/110-178:0.74251,(RR1_SPIOL/180-248:0.42225,RS1_SYNP6/114-182:0.34737):0.24212):0.21227):0.69707,(RS1H_BACSU/12-84:0.87116,EMB5_CAEEL/1180-1252:1.53261):0.11599):0.09387):0.29654,(((IF2A_DROME/12-87:0.58690,VK03_VACCC/8-82:1.55342):0.40548,RPOE_SULAC/78-150:1.05076):0.25877,RR1_PORPU/188-260:0.63743):0.23111):0.00000,(((RR1_SPIOL/257-329:0.40296,RS1_SYNP6/192-264:0.23579):0.24393,RS1_LEULA/227-299:0.25810):0.13827,RS1H_BACSU/269-342:0.55665):0.02939):0.03857);
ATP  (((((RNE_PORPU/31-111,RNG_ECOLI/34-121),RNE_ECOLI/35-119),(PNP_BACSU/618-690,PNP_ECOLI/618-690)),YABR_BACSU/2-74),((((((IF1_BACSU/1-71,IF1_MYCSP/20-90),(IF1C_PINTH/2-72,IF1C_EPIVI/1-71)),(RNR_ECOLI/640-725,RNR_MYCGE/640-725)),YHGF_ECOLI/647-720),(RS1_MYCLE/205-277,((RS1_ECOLI/188-260,(RS1_ECOLI/273-347,RS1_RHIME/279-353)),(RS1_ECOLI/360-434,RS1_RHIME/366-440)))),RS1_MYCLE/290-363),((((((((RPB7_ARATH/78-160,RPB7_RAT/78-161),RPB7_YEAST/80-161),((NUSA_BACSU/131-197,NUSA_THETH/141-208),NUSA_ECOLI/131-198)),((RR1_PORPU/23-96,(RS1_SYNP6/27-100,RR1_SPIOL/92-166)),(RS1_MYCLE/32-105,((RS1_RHIME/23-93,RS1_ECOLI/17-87),RS1_CHLMU/48-116)))),(RS1_ECOLI/447-520,RS1_RHIME/455-530)),((((((RNB_ECOLI/557-636,RNB_HAEIN/572-658),RS1H_BACSU/98-167),RS1_LEULA/140-210),(RS1_MYCLE/119-188,(RS1_RHIME/107-177,RS1_ECOLI/101-171))),(RR1_PORPU/110-178,(RR1_SPIOL/180-248,RS1_SYNP6/114-182))),(RS1H_BACSU/12-84,EMB5_CAEEL/1180-1252))),(((IF2A_DROME/12-87,VK03_VACCC/8-82),RPOE_SULAC/78-150),RR1_PORPU/188-260)),(((RR1_SPIOL/257-329,RS1_SYNP6/192-264),RS1_LEULA/227-299),RS1H_BACSU/269-342)));
ATL  46.3485
DNO  53
DLN  273
DID  0.380829
DPH  ((((((((RNE_PORPU/31-111:0.53271,RNG_ECOLI/34-121:0.40493):0.24182,RNE_ECOLI/35-119:0.28510):0.40217,(((((NUSA_BACSU/131-197:0.48196,NUSA_THETH/141-208:0.27226):0.13237,NUSA_ECOLI/131-198:0.40267):0.32646,(IF2A_DROME/12-87:0.49110,RS1_RHIME/455-530:0.42904):0.10784):0.07388,RS1_ECOLI/447-520:0.44771):0.04202,((((RS1_RHIME/23-93:0.31050,(RS1_CHLMU/48-116:0.31770,RS1_ECOLI/17-87:0.38395):0.16438):0.20515,(RS1_MYCLE/32-105:0.29170,((RR1_PORPU/23-96:0.43447,RR1_SPIOL/92-166:0.57048):0.27599,RS1_SYNP6/27-100:0.10768):0.33868):0.13101):0.06278,RS1H_BACSU/12-84:0.68706):0.10408,(((RS1_SYNP6/192-264:0.22383,((((RNR_MYCGE/640-725:0.65648,YABR_BACSU/2-74:0.17781):0.18310,(PNP_BACSU/618-690:0.27955,PNP_ECOLI/618-690:0.30953):0.09870):0.09974,(RS1H_BACSU/269-342:0.36166,RR1_PORPU/188-260:0.48124):0.10326):0.06268,(RR1_SPIOL/257-329:0.51593,RS1_LEULA/227-299:0.21756):0.10979):0.11767):0.07125,RS1_MYCLE/290-363:0.40448):0.05229,(RS1_MYCLE/205-277:0.28185,(((RS1_ECOLI/360-434:0.27695,RS1_RHIME/366-440:0.22232):0.17160,(RS1_ECOLI/273-347:0.25712,RS1_RHIME/279-353:0.26925):0.11663):0.04399,RS1_ECOLI/188-260:0.19382):0.10616):0.10734):0.14127):0.01179):0.08122):0.17119,EMB5_CAEEL/1180-1252:1.05005):0.03280,(((((RS1H_BACSU/98-167:0.32282,RS1_LEULA/140-210:0.39781):0.09920,(RS1_MYCLE/119-188:0.30130,(RS1_RHIME/107-177:0.31732,RS1_ECOLI/101-171:0.26121):0.11279):0.24668):0.15185,((RR1_PORPU/110-178:0.54823,(RR1_SPIOL/180-248:0.39915,RS1_SYNP6/114-182:0.38596):0.13205):0.13823,VK03_VACCC/8-82:0.94705):0.01855):0.07028,(RNB_ECOLI/557-636:0.59127,RNB_HAEIN/572-658:0.55123):0.32032):0.07153,(RPOE_SULAC/78-150:0.41439,((RPB7_ARATH/78-160:0.25409,RPB7_RAT/78-161:0.35463):0.20918,RPB7_YEAST/80-161:0.60310):0.37492):0.14789):0.04863):0.68978,IF1_BACSU/1-71:0.21384):0.07331,IF1_MYCSP/20-90:0.45093):0.16364,IF1C_PINTH/2-72:0.22960,IF1C_EPIVI/1-71:0.26881);
DTP  ((((((((RNE_PORPU/31-111,RNG_ECOLI/34-121),RNE_ECOLI/35-119),(((((NUSA_BACSU/131-197,NUSA_THETH/141-208),NUSA_ECOLI/131-198),(IF2A_DROME/12-87,RS1_RHIME/455-530)),RS1_ECOLI/447-520),((((RS1_RHIME/23-93,(RS1_CHLMU/48-116,RS1_ECOLI/17-87)),(RS1_MYCLE/32-105,((RR1_PORPU/23-96,RR1_SPIOL/92-166),RS1_SYNP6/27-100))),RS1H_BACSU/12-84),(((RS1_SYNP6/192-264,((((RNR_MYCGE/640-725,YABR_BACSU/2-74),(PNP_BACSU/618-690,PNP_ECOLI/618-690)),(RS1H_BACSU/269-342,RR1_PORPU/188-260)),(RR1_SPIOL/257-329,RS1_LEULA/227-299))),RS1_MYCLE/290-363),(RS1_MYCLE/205-277,(((RS1_ECOLI/360-434,RS1_RHIME/366-440),(RS1_ECOLI/273-347,RS1_RHIME/279-353)),RS1_ECOLI/188-260)))))),EMB5_CAEEL/1180-1252),(((((RS1H_BACSU/98-167,RS1_LEULA/140-210),(RS1_MYCLE/119-188,(RS1_RHIME/107-177,RS1_ECOLI/101-171))),((RR1_PORPU/110-178,(RR1_SPIOL/180-248,RS1_SYNP6/114-182)),VK03_VACCC/8-82)),(RNB_ECOLI/557-636,RNB_HAEIN/572-658)),(RPOE_SULAC/78-150,((RPB7_ARATH/78-160,RPB7_RAT/78-161),RPB7_YEAST/80-161)))),IF1_BACSU/1-71),IF1_MYCSP/20-90),IF1C_PINTH/2-72,IF1C_EPIVI/1-71);
DTL  28.1865
RID  0.230467
RPH  ((((RR1_SPIOL/257-329:0.37561,RS1_SYNP6/192-264:0.25615):0.20994,RS1_LEULA/227-299:0.26562):0.12535,RS1H_BACSU/269-342:0.58607):0.04838,((((RNE_PORPU/31-111:0.74713,RNG_ECOLI/34-121:0.56223):0.08373,RNE_ECOLI/35-119:0.62319):0.82145,(PNP_BACSU/618-690:0.49064,PNP_ECOLI/618-690:0.17018):0.09993):0.12655,YABR_BACSU/2-74:0.51483):0.28974,(((((((RPB7_ARATH/78-160:0.37395,RPB7_RAT/78-161:0.26117):0.26200,RPB7_YEAST/80-161:0.90469):1.25498,((NUSA_BACSU/131-197:0.57709,NUSA_THETH/141-208:0.28253):0.22630,NUSA_ECOLI/131-198:0.72208):0.63607):0.31359,((RR1_PORPU/23-96:0.65265,(RS1_SYNP6/27-100:0.16946,RR1_SPIOL/92-166:1.23307):0.19160):0.51637,(RS1H_BACSU/12-84:0.84505,(RS1_MYCLE/32-105:0.49577,(RS1_RHIME/23-93:0.57444,(RS1_CHLMU/48-116:0.31469,RS1_ECOLI/17-87:0.57280):0.12528):0.45357):0.00000):0.18896):0.26783):0.09154,(RS1_ECOLI/447-520:0.27727,RS1_RHIME/455-530:0.98351):0.61425):0.02313,((((((RNB_ECOLI/557-636:0.89351,RNB_HAEIN/572-658:0.87506):1.11642,RS1H_BACSU/98-167:0.05366):0.35761,RS1_LEULA/140-210:0.56165):0.14535,(RS1_MYCLE/119-188:0.22767,(RS1_RHIME/107-177:0.53356,RS1_ECOLI/101-171:0.27519):0.42376):0.23739):0.43794,(RR1_PORPU/110-178:0.75592,(RR1_SPIOL/180-248:0.42186,RS1_SYNP6/114-182:0.34547):0.22157):0.21040):0.73311,EMB5_CAEEL/1180-1252:1.62444):0.07180):0.23956,((((((IF1_BACSU/1-71:0.16298,IF1_MYCSP/20-90:0.80938):0.23849,(IF1C_PINTH/2-72:0.26916,IF1C_EPIVI/1-71:0.48305):0.00000):1.34439,RNR_MYCGE/640-725:1.03133):0.31639,(((IF2A_DROME/12-87:0.65875,VK03_VACCC/8-82:1.47636):0.38127,RPOE_SULAC/78-150:1.01670):0.29639,RR1_PORPU/188-260:0.59699):0.00000):0.33066,RS1_MYCLE/290-363:0.54382):0.05763,(RS1_MYCLE/205-277:0.30155,((RS1_ECOLI/188-260:0.29326,(RS1_ECOLI/273-347:0.19343,RS1_RHIME/279-353:0.35448):0.32975):0.02999,(RS1_ECOLI/360-434:0.29171,RS1_RHIME/366-440:0.34332):0.70171):0.12390):0.21244):0.01824):0.00000);
RTP  ((((RR1_SPIOL/257-329,RS1_SYNP6/192-264),RS1_LEULA/227-299),RS1H_BACSU/269-342),((((RNE_PORPU/31-111,RNG_ECOLI/34-121),RNE_ECOLI/35-119),(PNP_BACSU/618-690,PNP_ECOLI/618-690)),YABR_BACSU/2-74),(((((((RPB7_ARATH/78-160,RPB7_RAT/78-161),RPB7_YEAST/80-161),((NUSA_BACSU/131-197,NUSA_THETH/141-208),NUSA_ECOLI/131-198)),((RR1_PORPU/23-96,(RS1_SYNP6/27-100,RR1_SPIOL/92-166)),(RS1H_BACSU/12-84,(RS1_MYCLE/32-105,(RS1_RHIME/23-93,(RS1_CHLMU/48-116,RS1_ECOLI/17-87)))))),(RS1_ECOLI/447-520,RS1_RHIME/455-530)),((((((RNB_ECOLI/557-636,RNB_HAEIN/572-658),RS1H_BACSU/98-167),RS1_LEULA/140-210),(RS1_MYCLE/119-188,(RS1_RHIME/107-177,RS1_ECOLI/101-171))),(RR1_PORPU/110-178,(RR1_SPIOL/180-248,RS1_SYNP6/114-182))),EMB5_CAEEL/1180-1252)),((((((IF1_BACSU/1-71,IF1_MYCSP/20-90),(IF1C_PINTH/2-72,IF1C_EPIVI/1-71)),RNR_MYCGE/640-725),(((IF2A_DROME/12-87,VK03_VACCC/8-82),RPOE_SULAC/78-150),RR1_PORPU/188-260)),RS1_MYCLE/290-363),(RS1_MYCLE/205-277,((RS1_ECOLI/188-260,(RS1_ECOLI/273-347,RS1_RHIME/279-353)),(RS1_ECOLI/360-434,RS1_RHIME/366-440))))));
RTL  44.7728
LNK  EMB5_CAEEL/1180-1252:P34703:D14635
LNK  IF1_BACSU/1-71:P20458:M26414
LNK  IF1C_EPIVI/1-71:P30070:M81884
LNK  IF1C_PINTH/2-72:P41632:D17510
LNK  IF1_MYCSP/20-90:P38037:L23478
LNK  IF2A_DROME/12-87:P41374:L19196
LNK  NUSA_BACSU/131-197:P32727:Z18631
LNK  NUSA_ECOLI/131-198:P03003:U18997
LNK  NUSA_THETH/141-208:P48514:Z48001
LNK  PNP_BACSU/618-690:P50849:U29668
LNK  PNP_ECOLI/618-690:P05055:J02638
LNK  RNB_ECOLI/557-636:P30850:X67913
LNK  RNB_HAEIN/572-658:P44440:U32846
LNK  RNE_ECOLI/35-119:P21513:U00096
LNK  RNE_PORPU/31-111:P51211:U38804
LNK  RNG_ECOLI/34-121:P25537:X57166
LNK  RNR_ECOLI/640-725:P21499:
LNK  RNR_MYCGE/640-725:P47350:U39691
LNK  RPB7_ARATH/78-160:P38421:M90505
LNK  RPB7_RAT/78-161:P62489:Z71925
LNK  RPB7_YEAST/80-161:P34087:S59775
LNK  RPOE_SULAC/78-150:P39466:X75411
LNK  RR1_PORPU/110-178:P51345:U38804
LNK  RR1_PORPU/188-260:P51345:U38804
LNK  RR1_PORPU/23-96:P51345:U38804
LNK  RR1_SPIOL/180-248:P29344:M82923
LNK  RR1_SPIOL/257-329:P29344:M82923
LNK  RR1_SPIOL/92-166:P29344:M82923
LNK  RS1_CHLMU/48-116:P38016:M23000
LNK  RS1_ECOLI/101-171:P02349:V00342
LNK  RS1_ECOLI/17-87:P02349:V00342
LNK  RS1_ECOLI/188-260:P02349:V00342
LNK  RS1_ECOLI/273-347:P02349:V00342
LNK  RS1_ECOLI/360-434:P02349:V00342
LNK  RS1_ECOLI/447-520:P02349:V00342
LNK  RS1H_BACSU/12-84:P38494:U11687
LNK  RS1H_BACSU/269-342:P38494:U11687
LNK  RS1H_BACSU/98-167:P38494:U11687
LNK  RS1_LEULA/140-210:P50889:U24086
LNK  RS1_LEULA/227-299:P50889:U24086
LNK  RS1_MYCLE/119-188:P46836:Z46257
LNK  RS1_MYCLE/205-277:P46836:AL583921
LNK  RS1_MYCLE/290-363:P46836:Z46257
LNK  RS1_MYCLE/32-105:P46836:Z46257
LNK  RS1_RHIME/107-177:P14129:AL591783
LNK  RS1_RHIME/23-93:P14129:AL591783
LNK  RS1_RHIME/279-353:P14129:X07528
LNK  RS1_RHIME/366-440:P14129:X07528
LNK  RS1_RHIME/455-530:P14129:X07528
LNK  RS1_SYNP6/114-182:P46228:D28752
LNK  RS1_SYNP6/192-264:P46228:D28752
LNK  RS1_SYNP6/27-100:P46228:D28752
LNK  VK03_VACCC/8-82:P20639:M35027
LNK  YABR_BACSU/2-74:P37560:L23497
LNK  YHGF_ECOLI/647-720:P46837:
AMK  xxxxxxxxxxxxxxxxx.xxxxx.xxxxx.xxxxxxxxxxxxxxxxx.........xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DMK  xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...xxxxxxxxxxxxxxx...xxxxxxxxxxxxxxx...xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx...........................xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
NAM  RS1_ECOLI/101-171
ASQ  AYEDAETVTGVINGKVK.-GGFT.VELN-.-GIRAFLPGSLVDVR--.........---PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRR
DSQ  GCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAG...---GGCGGCTTCACT...GTTGAGCTGAAC---...---GGTATTCGTGCGTTCCTGCCAGGTTCTCTGGTAGACGTTCGT------...........................---------CCGGTGCGTGACACTCTGCACCTGGAAGGCAAAGAGCTTGAATTTAAAGTAATCAAGCTGGATCAGAAGCGCAACAACGTTGTTGTTTCTCGTCGT
TRN  11011101101011011
NAM  RS1_RHIME/107-177
ASQ  KFEAGERVEGIIFNQVK.-GGFT.VDLD-.-GAVAFLPRSQVDIR--.........---PIRDVTPLMHNPQPFEILKMDKRRGNIVVSRR
DSQ  AAGTTCGAAGCCGGCGAACGCGTCGAAGGCATCATCTTCAACCAGGTCAAG...---GGCGGCTTCACC...GTCGATCTCGAC---...---GGCGCCGTAGCCTTCCTGCCGCGTTCGCAGGTCGACATCCGT------...........................---------CCGATCCGCGACGTGACGCCGCTGATGCACAACCCGCAGCCCTTCGAAATCCTCAAGATGGACAAGCGCCGCGGCAACATCGTCGTTTCGCGCCGC
TRN  11011111101111111
NAM  RS1_LEULA/140-210
ASQ  SFAEGDTVDAKVINAVR.-GGLI.VDVN-.-GVRGFVPASMVAER--.........---FVSDLNQFKNKDIKAQVIEIDPANARLILSRK
DSQ  AGCTTTGCTGAAGGTGACACAGTTGATGCCAAGGTTATCAACGCTGTTCGT...---GGTGGTTTGATT...GTTGATGTTAAC---...---GGCGTACGTGGTTTCGTACCAGCATCAATGGTTGCAGAACGT------...........................---------TTCGTTTCTGATTTGAACCAATTCAAGAATAAGGATATTAAAGCACAAGTTATCGAAATTGACCCTGCTAATGCACGTTTGATTTTGTCACGTAAG
TRN  11111101111011001
NAM  RS1_MYCLE/119-188
ASQ  LKEKDEAVKGIVIEVVK.-GGLI.LDIG-.--LRGFLPASLVEMR--.........---RVRDLQPYIGKEIEAKIIELDKNRNNVVLSRR
DSQ  CTTAAGGAGAAGGATGAGGCTGTCAAGGGCATCGTCATCGAGGTGGTCAAG...---GGCGGTCTGATC...CTCGATATCGGG---...------TTGCGTGGCTTCCTACCTGCCTCGTTGGTGGAGATGCGC------...........................---------CGTGTTCGCGATCTGCAACCGTACATCGGCAAGGAGATCGAGGCCAAGATCATCGAGCTAGACAAAAACCGCAACAACGTGGTATTATCGCGGCGG
TRN  11011101101011010
NAM  RS1H_BACSU/98-167
ASQ  KFETKEVFEAEVKDVVK.-GGLV.VDIG-.--VRGFIPASLVEA---.........--HFVEDFTDYKGKTLSLLVVELDRDKNRVILSHR
DSQ  AAATTTGAAACAAAAGAAGTGTTTGAAGCTGAAGTGAAAGATGTCGTGAAA...---GGCGGCCTTGTC...GTTGATATCGGC---...------GTTCGCGGTTTTATTCCGGCATCACTTGTTGAAGCA---------...........................------CATTTCGTTGAAGACTTCACTGACTATAAAGGAAAAACACTGTCACTGCTCGTTGTAGAGCTTGACCGTGATAAAAACCGCGTGATCCTTTCACACCGT
TRN  11011101101011001
NAM  RS1_SYNP6/114-182
ASQ  LQTEDATVRSEVFATNR.-GGAL.VRIE-.-GLRGFIPGSHISTR--.........-----KAKEDLVGEELPLKFLEVDEDRNRLVLSHR
DSQ  CTCCAAACCGAAGACGCCACCGTGCGATCAGAAGTATTCGCCACCAACCGC...---GGCGGTGCTTTG...GTGCGGATTGAA---...---GGCCTGCGCGGCTTCATTCCGGGCTCGCACATCAGCACCCGC------...........................---------------AAAGCCAAAGAGGATTTGGTGGGCGAAGAACTCCCCCTGAAATTTTTGGAAGTGGACGAAGACCGCAACCGCTTGGTGCTCAGCCACCGT
TRN  11011101101011001
NAM  RR1_SPIOL/180-248
ASQ  LQAEDVVVKGKIVGAN-.-KGGV.VALV-.EGLRGFVPFSQISS---.........----KSSAEELLEKEIPLKFVEVDEEQSRLVMSNR
DSQ  TTGCAAGCTGAGGATGTTGTAGTTAAGGGGAAGATTGTTGGGGCGAAC---...---AAAGGTGGTGTG...GTGGCTCTAGTG---...GAAGGCCTTCGTGGTTTTGTTCCCTTTTCGCAAATATCATCT---------...........................------------AAATCCTCTGCAGAAGAACTTCTTGAGAAAGAGATCCCTCTAAAGTTTGTTGAGGTTGATGAGGAACAATCCAGGTTGGTAATGAGTAACCGC
TRN  10010101110011001
NAM  RR1_PORPU/110-178
ASQ  LLAEDSLLDVRIKGFNK.-GGMI.VNLE-.-GISGFVPNSHLNN---.........----FSKNTSSTNKFIKLKLLNVEEKSNNLILSHR
DSQ  TTACTAGCTGAAGATTCTTTACTCGATGTTAGAATCAAAGGATTTAATAAA...---GGAGGCATGATA...GTTAACCTAGAA---...---GGCATATCTGGTTTTGTTCCAAATTCTCATCTGAACAAT---------...........................------------TTCTCCAAAAACACCTCTTCTACAAATAAATTCATTAAACTCAAATTACTTAACGTTGAAGAAAAATCAAATAATCTGATACTCAGTCATAGG
TRN  10010101100011000
NAM  RS1_RHIME/455-530
ASQ  ELRKNAVVSAEVIGVND.-GGIE.VRLVNhEDVTAFIRRADLSRD--.........-RDEQRPERFSVGQTVDARVTNFSKKDRKIQLSIK
DSQ  GAACTGCGCAAGAACGCCGTCGTTTCGGCTGAAGTCATCGGCGTCAACGAT...---GGCGGCATCGAA...GTGCGGCTCGTCAACcacGAGGACGTCACCGCCTTCATCCGTCGCGCCGACCTCTCGCGCGAT------...........................---CGCGACGAACAGCGTCCGGAGCGTTTCTCGGTCGGCCAGACCGTCGATGCGCGGGTCACCAACTTCTCCAAGAAGGACCGCAAGATCCAGCTGTCGATCAAG
TRN  11011111101111111
NAM  RS1_ECOLI/447-520
ASQ  LNKKGAIVTGKVTAVDA.-KGAT.VELA-.DGVEGYLRASEASRD--.........-RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR
DSQ  CTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCT...---AAAGGCGCAACC...GTAGAACTGGCT---...GACGGCGTTGAAGGTTACCTGCGTGCTTCTGAAGCATCCCGTGAC------...........................---CGCGTTGAAGACGCTACCCTGGTTCTGAGCGTTGGCGACGAAGTTGAAGCTAAATTCACCGGCGTTGATCGTAAAAACCGCGCAATCAGCCTGTCTGTTCGT
TRN  11011101101011011
NAM  RS1_RHIME/366-440
ASQ  SHPAGTEVEGEVKNKTE.-FGLF.IGLD-.GDVDGMVHLSDLDWNR-.........-PGEQVIEEFNKGDVVRAVVLDVDVDKERISLGIK
DSQ  AGCCATCCGGCTGGCACGGAAGTCGAAGGCGAAGTCAAGAACAAGACCGAA...---TTCGGTCTGTTC...ATCGGCCTCGAT---...GGCGATGTCGACGGCATGGTCCACCTCTCCGACCTCGACTGGAACCGC---...........................---CCGGGCGAGCAGGTCATCGAAGAATTCAACAAGGGCGACGTCGTCCGTGCTGTCGTTCTCGATGTGGACGTCGACAAGGAGCGCATCTCGCTCGGCATCAAG
TRN  11011111101111111
NAM  RS1_ECOLI/360-434
ASQ  THNKGDRVEGKIKSITD.-FGIF.IGLD-.GGIDGLVHLSDISWNV-.........-AGEEAVREYKKGDEIAAVVLQVDAERERISLGVK
DSQ  ACCCACAACAAGGGCGACCGTGTTGAAGGTAAAATCAAGTCTATCACTGAC...---TTCGGTATCTTC...ATCGGCTTGGAC---...GGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTT---...........................---GCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCTCCCTGGGCGTTAAA
TRN  11011101101011011
NAM  RR1_PORPU/188-260
ASQ  NLIVGNIIEGVINQITP.-YGLF.IKAG-.-NLKGLVHISEINVK--.........-QVERIPSQFKIGDTIKAVIIHVDKKQGRLSLSMK
DSQ  AATCTAATTGTTGGAAATATTATCGAAGGAGTAATCAATCAAATTACGCCT...---TACGGATTATTT...ATAAAGGCTGGT---...---AATCTAAAAGGACTGGTACATATTTCTGAAATTAATGTTAAA------...........................---CAAGTAGAGAGAATACCATCTCAATTCAAAATAGGGGACACAATCAAAGCAGTTATTATTCATGTAGATAAAAAACAAGGGCGACTGTCATTATCCATGAAA
TRN  10010101100011000
NAM  RS1_RHIME/279-353
ASQ  KYPVGKKISGTVTNITD.-YGAF.VELE-.PGIEGLIHISEMSWTK-.........-KNVHPGKILSTSQEVDVVVLEVDPTKRRISLGLK
DSQ  AAGTATCCGGTCGGCAAGAAGATCTCCGGTACCGTCACGAACATCACCGAC...---TACGGTGCGTTC...GTCGAGCTGGAG---...CCGGGCATCGAAGGCCTGATACACATCTCCGAAATGTCCTGGACGAAG---...........................---AAGAACGTTCACCCCGGCAAGATCCTGTCCACGAGCCAGGAAGTCGACGTGGTCGTTCTCGAAGTCGACCCGACCAAGCGCCGCATCTCGCTCGGCCTCAAG
TRN  10010111100111011
NAM  RS1_ECOLI/273-347
ASQ  RYPEGTKLTGRVTNLTD.-YGCF.VEIE-.EGVEGLVHVSEMDWTN-.........-KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK
DSQ  CGTTATCCGGAAGGTACCAAACTGACTGGTCGCGTGACCAACCTGACCGAC...---TACGGCTGCTTC...GTTGAAATCGAA---...GAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAAC---...........................---AAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAAGTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAA
TRN  11011101101011011
NAM  RS1_ECOLI/188-260
ASQ  NLQEGMEVKGIVKNLTD.-YGAF.VDLG-.-GVDGLLHITDMAWK--.........-RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK
DSQ  AACCTGCAGGAAGGCATGGAAGTTAAAGGTATCGTTAAGAACCTCACTGAC...---TACGGTGCATTC...GTTGATCTGGGC---...---GGCGTTGACGGCCTGCTGCACATCACTGACATGGCCTGGAAA------...........................---CGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAATCACTGTTAAAGTGCTGAAGTTCGACCGCGAACGTACCCGTGTATCCCTGGGCCTGAAA
TRN  11011101101011011
NAM  RS1_MYCLE/205-277
ASQ  QLQKGAIRKGVVSSIVN.-FGAF.VDLG-.-GVDGLVHVSELSWK--.........-HIDHPSEVVQVGNEVTVEVLDVDMDRERVSLSLK
DSQ  CAGCTGCAGAAGGGTGCTATACGCAAGGGTGTAGTATCGTCCATCGTAAAC...---TTTGGTGCGTTT...GTCGATCTGGGC---...---GGTGTAGACGGTTTGGTGCACGTCTCCGAACTGTCCTGGAAG------...........................---CACATCGACCATCCGTCCGAGGTGGTCCAGGTGGGGAATGAAGTTACCGTCGAGGTTCTCGACGTTGATATGGACCGCGAGCGGGTTTCGTTGTCTCTCAAA
TRN  10010101100011011
NAM  RS1_MYCLE/290-363
ASQ  THAIGQIVPGKVTKLVP.-FGAF.VRVE-.EGIEGLVHISELAER--.........-HVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLK
DSQ  ACCCACGCCATCGGGCAAATCGTGCCAGGTAAGGTGACCAAGTTGGTTCCG...---TTTGGTGCCTTC...GTTCGTGTTGAG---...GAAGGCATCGAAGGTCTGGTGCACATCTCGGAGCTGGCCGAACGG------...........................---CACGTCGAGGTGCCTGACCAGGTGGTTGCTGTCGGCGACGATGCGATGGTCAAAGTCATTGACATCGACTTGGAGCGACGCCGGATTTCGCTGTCGTTGAAA
TRN  11011101101011011
NAM  YHGF_ECOLI/647-720
ASQ  DLQPGMILEGAVTNVTN.-FGAF.VDIG-.VHQDGLVHISSLSNK--.........-FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
NAM  RS1H_BACSU/269-342
ASQ  KVKPGDVLEGTVQRLVS.-FGAF.VEIL-.PGVEGLVHISQISNK--.........-HIGTPHEVLEEGQTVKVKVLDVNENEERISLSMR
DSQ  AAAGTGAAGCCTGGCGATGTGCTTGAAGGAACTGTACAGCGTCTTGTAAGC...---TTCGGTGCCTTT...GTTGAAATCCTT---...CCAGGTGTTGAAGGTCTCGTTCATATTTCTCAAATTTCCAATAAA------...........................---CACATCGGCACGCCGCATGAAGTCCTTGAAGAAGGACAGACTGTAAAAGTGAAGGTTCTTGATGTGAATGAAAATGAGGAGCGCATTTCATTAAGCATGCGT
TRN  11011101111011000
NAM  RS1_LEULA/227-299
ASQ  KLSVGEVVEGTVARLTD.-FGAF.VDLG-.-GVDGLVHVSEISHD--.........-RVKNPADVLTKGDKVDVKILALDTEKGRISLSIK
DSQ  AAGTTGTCAGTTGGTGAAGTTGTTGAAGGAACTGTTGCCCGTTTGACAGAC...---TTCGGCGCATTC...GTTGACTTGGGT---...---GGTGTTGATGGTTTGGTTCACGTATCAGAAATCTCACACGAT------...........................---CGTGTGAAGAACCCGGCCGATGTATTGACAAAGGGTGACAAGGTTGATGTTAAGATCTTGGCATTGGACACTGAAAAGGGTCGTATCTCATTGTCAATCAAA
TRN  11111101111011001
NAM  RS1_SYNP6/192-264
ASQ  RLEVGEVVVGAVRGIKP.-YGAF.IDIG-.-GVSGLLHISEISHD--.........-HIETPHSVFNVNDEVKVMIIDLDAERGRISLSTK
DSQ  CGCCTCGAAGTGGGCGAAGTCGTCGTCGGTGCAGTGCGCGGTATCAAACCC...---TATGGTGCCTTT...ATTGACATCGGT---...---GGCGTCAGCGGTCTACTGCACATCTCCGAAATTTCCCACGAC------...........................---CACATCGAGACTCCACACAGCGTCTTCAATGTCAATGACGAAGTCAAAGTCATGATCATTGATTTGGATGCCGAACGCGGTCGGATTTCGCTGTCGACCAAG
TRN  11011101101011011
NAM  RR1_SPIOL/257-329
ASQ  QLGIGSVVTGTVQSLKP.-YGAF.IDIG-.-GINGLLHVSQISHD--.........-RVSDIATVLQPGDTLKVMILSHDRERGRVSLSTK
DSQ  CAGCTTGGTATTGGATCAGTTGTCACAGGAACTGTTCAATCTCTTAAACCT...---TACGGTGCCTTT...ATTGATATTGGT---...---GGAATTAATGGGCTTCTTCATGTTAGTCAAATCAGTCATGAT------...........................---CGTGTCTCGGATATTGCAACTGTCCTACAACCTGGTGACACTTTGAAGGTCATGATTTTGAGCCATGACCGTGAAAGAGGTAGGGTGAGTCTGTCGACAAAG
TRN  10010101100011001
NAM  YABR_BACSU/2-74
ASQ  SIEVGSKLQGKITGITN.-FGAF.VELP-.GGSTGLVHISEVADN--.........-YVKDINDHLKVGDQVEVKVINVEKDGK-IGLSIK
DSQ  TCGATTGAAGTTGGCAGCAAGTTGCAAGGGAAAATTACAGGTATTACAAAT...---TTTGGAGCATTT...GTTGAATTGCCT---...GGAGGCTCAACCGGTCTCGTTCACATTAGTGAGGTAGCTGATAAT------...........................---TATGTCAAAGACATTAACGACCACTTAAAAGTCGGCGACCAAGTTGAAGTGAAAGTCATCAACGTTGAAAAAGACGGGAAA---ATTGGTTTATCTATTAAA
TRN  11011101111011000
NAM  PNP_ECOLI/618-690
ASQ  EIEVGRVYTGKVTRIVD.-FGAF.VAIG-.GGKEGLVHISQIADK--.........-RVEKVTDYLQMGQEVPVKVLEVDRQGR-IRLSIK
DSQ  GAAATCGAAGTGGGCCGCGTCTACACTGGTAAAGTGACCCGTATCGTTGAC...---TTTGGCGCATTT...GTTGCCATCGGC---...GGCGGTAAAGAAGGTCTGGTCCACATCTCTCAAATCGCTGACAAA------...........................---CGCGTTGAGAAAGTGACCGATTACCTGCAGATGGGTCAGGAAGTACCGGTGAAAGTTCTGGAAGTTGATCGCCAGGGCCGT---ATCCGTCTGAGCATTAAA
TRN  11011101101011011
NAM  PNP_BACSU/618-690
ASQ  EVEVGQLYLGKVKRIEK.-FGAF.VEIF-.SGKDGLVHISELALE--.........-RVGKVEDVVKIGDEILVKVTEIDKQGR-VNLSRK
DSQ  GAGGTTGAAGTCGGCCAACTTTACCTAGGTAAAGTGAAACGGATTGAAAAA...---TTCGGGGCTTTC...GTTGAAATTTTC---...AGCGGAAAAGACGGTTTGGTGCACATTTCAGAGCTTGCGCTTGAA------...........................---CGCGTAGGGAAAGTTGAAGATGTTGTGAAAATCGGAGACGAGATTCTTGTCAAAGTCACTGAAATTGATAAACAAGGACGA---GTGAATTTATCCCGCAAA
TRN  11011101111011000
NAM  RNR_MYCGE/640-725
ASQ  SKQIGKTFSGFISAITS.-FGIF.MRMDE.NNFDGLIKITTIPDDFFifek.ekmvLKGRKTNKVYKIGDRLEAKLSEIDFIQKRAILTLI
DSQ  TCAAAACAAATTGGCAAAACCTTCAGCGGATTTATTTCAGCAATTACTAGC...---TTTGGAATTTTT...ATGAGAATGGATGAA...AATAACTTTGATGGGTTAATCAAAATTACAACTATCCCTGATGATTTCTTTatttttgaaaag...gaaaaaatggtaTTGAAAGGAAGAAAAACTAATAAGGTTTATAAAATTGGCGATCGTTTGGAAGCTAAACTAAGTGAGATTGATTTCATCCAAAAACGTGCTATTTTAACACTCATA
TRN  10010101110011000
NAM  RNR_ECOLI/640-725
ASQ  LDQVGNVFKGVISSVTG.-FGFF.VRLDD.LFIDGLVHVSSLDNDYYrfdq.vgqrLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLI
NAM  RPOE_SULAC/78-150
ASQ  TPIIHEVIEGEVSQVDN.-YGVY.VNMG-.-PVDGLVHISQITDDN-.........-LKFDSNRGILIGEKSKKSITKGDRVRA-MIISAS
DSQ  ACACCTATAATACATGAAGTTATTGAAGGAGAAGTAAGCCAAGTCGACAAT...---TACGGTGTTTAT...GTTAATATGGGT---...---CCCGTTGATGGTTTAGTTCATATATCTCAAATAACTGACGACAAT---...........................---TTGAAGTTTGACTCTAATAGAGGAATATTGATAGGTGAAAAGAGTAAGAAGAGCATTACAAAAGGTGATAGAGTTAGGGCT---ATGATAATTAGTGCATCT
TRN  10010101110011010
NAM  EMB5_CAEEL/1180-1252
ASQ  EHMLGDSRQG-GCPGTP.-VGIR.VRFD-.NGMTGFCPNKNISSS--.........-HVDNPLTRVKINQPYYFKVLKLDKERFSLFLSCK
DSQ  GAACATATGCTCGGTGACTCTCGTCAAGGT---GGATGTCCTGGAACACCA...---GTCGGAATTCGA...GTCAGATTTGAC---...AATGGAATGACTGGATTCTGTCCGAACAAGAACATCTCATCAAGT------...........................---CACGTAGACAATCCATTAACCCGAGTCAAGATAAATCAGCCATATTACTTCAAAGTTCTCAAGTTGGACAAGGAGAGATTCTCACTATTCCTAAGTTGTAAG
TRN  10010101110011000
NAM  RS1_ECOLI/17-87
ASQ  ETRPGSIVRGVVVAIDK.-DVVL.VDAG-.LKSESAIPAEQFKN---.........---AQGELEIQVGDEVDVALDAVEDGFGETLLSRE
DSQ  GAAACCCGCCCGGGTTCTATCGTTCGTGGCGTTGTTGTTGCTATCGACAAA...---GACGTAGTACTG...GTTGACGCTGGT---...CTGAAATCTGAGTCCGCCATCCCGGCTGAGCAGTTCAAAAAC---------...........................---------GCCCAGGGCGAGCTGGAAATCCAGGTAGGTGACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAG
TRN  11011101101011011
NAM  RS1_CHLMU/48-116
ASQ  EVQPGAILKGTVVDISK.-DFVV.VDVG-.LKSEGVIPMSEFID---.........-----SSEGLSVGAEVEVYLDQTEDEEGKVVLSRE
DSQ  GAAGTACAGCCTGGTGCGATCCTAAAAGGTACAGTTGTCGACATAAGCAAA...---GATTTTGTCGTG...GTTGACGTTGGA---...TTAAAATCTGAAGGAGTCATCCCGATGTCGGAGTTTATTGAC---------...........................---------------TCTTCAGAAGGTTTGTCCGTCGGAGCTGAGGTTGAAGTTTATTTGGACCAAACTGAAGACGAAGAAGGAAAGGTCGTCCTGTCCAGAGAA
TRN  10010101100011000
NAM  RS1_RHIME/23-93
ASQ  DLAEGYVAKGIVTAIEK.-DVAI.VDVG-.LKVEGRVPLKEFGAKA-.........-----KDGTLKVGDEVEVYVERIENALGEAVLSRE
DSQ  GACCTCGCCGAAGGCTATGTCGCCAAGGGCATCGTCACGGCGATCGAAAAA...---GACGTCGCAATC...GTCGACGTCGGC---...CTGAAGGTCGAAGGCCGCGTACCGCTGAAGGAATTCGGCGCCAAGGCC---...........................---------------AAGGACGGCACGCTGAAGGTCGGCGACGAAGTCGAAGTCTATGTCGAGCGCATTGAAAACGCACTCGGCGAAGCAGTCCTCTCGCGCGAG
TRN  11011101101011011
NAM  RS1_MYCLE/32-105
ASQ  YFNDGDIVEGTIVKVDR.-DEVL.LDIG-.YKTEGVIPARELSIK--.........-HDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKK
DSQ  TACTTTAACGATGGCGACATCGTCGAAGGCACCATCGTTAAAGTGGACCGG...---GACGAGGTGCTC...CTTGACATCGGA---...TACAAGACCGAAGGGGTAATTCCCGCCCGCGAACTCTCCATCAAA------...........................---CACGACGTCGACCCCAATGAGGTCGTTTCTGTGGGCGACGAGGTGGAGGCTCTGGTACTTACCAAAGAGGACAAAGAGGGGCGGCTCATCCTGTCCAAGAAG
TRN  11011101101011011
NAM  RS1H_BACSU/12-84
ASQ  VPEVGDVVKGIVTKVED.-KHVD.VEIIN.VKQSGIIPISELSSL--.........-HVEKASDVVKVDDELDLKVTKVEDD--ALILSKR
DSQ  GTGCCAGAGGTTGGAGATGTAGTTAAAGGGATTGTGACAAAGGTAGAAGAC...---AAACATGTAGAT...GTAGAAATTATCAAT...GTCAAACAATCCGGTATTATTCCAATCAGTGAATTATCAAGTCTT------...........................---CATGTAGAGAAAGCATCGGATGTTGTTAAAGTAGACGACGAGCTTGACCTGAAAGTAACAAAAGTGGAAGACGAT------GCTTTGATTTTATCTAAACGT
TRN  11011101101011000
NAM  RR1_SPIOL/92-166
ASQ  NSEMGSRVKGTVFCTDA.-NGAL.VDIT-.AKSSAYLPLAEACIY--.........RIKNVEEAGIIPGVREEFVIIGENEADDSLILSLR
DSQ  AATTCCGAAATGGGTTCCAGGGTCAAGGGTACAGTATTCTGCACAGATGCC...---AATGGGGCATTA...GTCGATATAACT---...GCAAAATCTTCGGCATACTTGCCTCTCGCAGAGGCATGTATTTAC------...........................AGAATAAAAAACGTGGAGGAAGCTGGTATAATCCCAGGTGTACGTGAAGAATTTGTAATCATTGGTGAAAATGAAGCTGATGATAGCTTAATCTTGAGTTTGCGC
TRN  10010101110011010
NAM  RS1_SYNP6/27-100
ASQ  HFNPGDTVVGTVFNLEP.-RGAL.IDIG-.AKTAAFFPVQEMSIN--.........-RVESPEEVLQPSEMREFFILSDENEDGQLTLSIR
DSQ  CACTTCAATCCGGGTGATACCGTCGTCGGCACAGTCTTCAATCTAGAACCG...---CGGGGTGCCCTG...ATTGACATCGGT---...GCGAAAACGGCAGCATTTTTCCCGGTTCAAGAGATGTCGATCAAC------...........................---CGGGTCGAAAGCCCGGAAGAAGTTCTTCAGCCCAGCGAAATGCGGGAGTTTTTCATCCTCAGCGATGAGAACGAAGATGGTCAGCTGACGCTGTCGATCCGC
TRN  11011101101011011
NAM  RR1_PORPU/23-96
ASQ  DLNLGDIVAGTIFSFEL.-NGVL.VDIG-.TPVSAYLPIQEVSSN--.........-QELNNFNSLNINDTREFFLLDYNVESRQLILSIR
DSQ  GACTTAAATCTTGGTGATATTGTAGCTGGTACAATATTTAGTTTTGAACTC...---AATGGGGTATTA...GTAGATATTGGA---...ACACCTGTGTCAGCATATTTGCCAATACAAGAAGTCTCTAGTAAT------...........................---CAAGAGCTAAATAATTTCAACTCTTTAAACATCAACGATACTAGAGAATTCTTCTTATTAGATTATAATGTTGAGTCAAGGCAACTAATTTTATCTATTCGG
TRN  10010101110011000
NAM  VK03_VACCC/8-82
ASQ  LPNAGDVIKGRVYEKD-.-YALY.IYLFD.YPHSEAILAESVKMHM-.........-DRYVEYRDKLVGKTVKVKVIRVDYTKGYIDVNYK
DSQ  TTGCCCAATGCGGGCGATGTAATAAAGGGCAGAGTATACGAGAAGGAT---...---TATGCTCTATAC...ATTTATCTTTTTGAC...TATCCTCACTCTGAAGCTATCTTGGCAGAGAGTGTTAAGATGCATATG---...........................---GATAGATATGTTGAATATAGGGATAAACTGGTAGGGAAAACTGTAAAAGTTAAAGTGATTAGAGTTGATTATACAAAAGGATATATAGATGTCAATTACAAA
TRN  10010101100011011
NAM  IF2A_DROME/12-87
ASQ  YPEIEDVVMVNVLSIAE.-MGAY.VHLLEyNNIEGMILLSELSRR--.........-RIRSINKLIRVGKTEPVVVIRVDKEKGYIDLSKR
DSQ  TATCCGGAGATCGAGGATGTCGTTATGGTGAACGTGCTGTCCATCGCCGAG...---ATGGGCGCCTAC...GTTCATCTGCTTGAGtacAACAACATCGAGGGCATGATCCTGCTGTCGGAGCTGTCCCGCCGG------...........................---CGCATCCGCTCCATCAACAAGCTGATTCGTGTCGGCAAGACCGAACCGGTGGTGGTTATCCGTGTTGACAAGGAGAAGGGCTACATCGATCTGTCGAAGCGT
TRN  11011111101111111
NAM  NUSA_ECOLI/131-198
ASQ  REHEGEIITGVVKKVNR.-DNIS.LDLG-.NNAEAVILREDML----.........-----PRENFRPGDRVRGVLYSVRPEARGAQLFVT
DSQ  CGTGAACACGAAGGTGAAATCATCACCGGCGTGGTGAAAAAAGTAAACCGC...---GACAACATCTCT...CTGGATCTGGGC---...AACAACGCTGAAGCCGTGATCCTGCGCGAAGATATGCTG------------...........................---------------CCGCGTGAAAACTTCCGCCCTGGCGACCGCGTTCGTGGCGTGCTCTATTCCGTTCGCCCGGAAGCGCGTGGCGCGCAACTGTTCGTCACT
TRN  11011101101011011
NAM  NUSA_THETH/141-208
ASQ  KDKEGQVLTGVVTRVDN.RGNVF.VELG-.-RGEAYLPRSEQI----.........-----PTEKYHPGQRIKVYLKKVDKSAKGPSLLVS
DSQ  AAGGACAAGGAGGGGCAGGTCCTCACCGGGGTGGTCACCCGGGTGGACAAC...CGGGGCAACGTCTTC...GTGGAGCTGGGC---...---CGGGGCGAGGCCTACCTCCCCCGGAGCGAGCAGATC------------...........................---------------CCCACGGAGAAGTACCACCCCGGCCAGCGGATCAAGGTCTACCTGAAGAAGGTGGACAAGTCCGCCAAGGGCCCCTCCCTCCTGGTGAGC
TRN  11011111101111111
NAM  NUSA_BACSU/131-197
ASQ  IDREEDIMTGIVQRLDN.-KFIY.VSLG-.-KIEALLPVNEQM----.........-----PNESYKPHDRIKVYITKVEKTTKGPQIYVS
DSQ  ATCGACCGTGAAGAAGACATCATGACAGGGATCGTCCAGCGTCTGGACAAT...---AAATTTATCTAC...GTGTCTTTAGGC---...---AAAATAGAAGCCTTGCTGCCGGTTAATGAGCAAATG------------...........................---------------CCGAATGAAAGCTACAAGCCCCATGACCGCATTAAGGTATATATCACAAAAGTAGAAAAAACAACGAAGGGTCCGCAGATTTATGTGTCA
TRN  10010101100011000
NAM  RNE_ECOLI/35-119
ASQ  EQKKANIYKGKITRIEPsLEAAF.VDYG-.AERHGFLPLKEIAREYFpan...ysaHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTF
DSQ  GAGCAGAAAAAGGCAAACATCTACAAAGGTAAAATCACCCGCATTGAACCGagtCTGGAAGCTGCTTTT...GTTGATTACGGC---...GCTGAACGTCACGGTTTCCTCCCACTAAAAGAAATTGCCCGCGAATATTTCcctgctaac.........tacagtgctCATGGTCGTCCCAACATTAAAGATGTGTTGCGTGAAGGTCAGGAAGTCATTGTTCAGATCGATAAAGAAGAGCGCGGCAACAAAGGCGCGGCATTAACCACCTTT
TRN  11011101101011010
NAM  RNG_ECOLI/34-121
ASQ  RGIVGNIYKGRVSRVLPgMQAAF.VDIG-.LDKAAFLHASDIMPHTEcvageeqkqFTVRDISELVRQGQDLMVQVVKDPLGTKGARLTTD
DSQ  CGCGGAATAGTAGGCAATATCTACAAGGGTCGTGTAAGTCGTGTACTTCCGggtATGCAGGCGGCTTTT...GTAGATATTGGG---...CTGGATAAAGCCGCGTTTCTTCATGCATCCGACATCATGCCGCACACCGAAtgtgtggcgggtgaagaacaaaagcaaTTCACGGTGCGCGACATCTCGGAACTGGTTCGTCAGGGGCAAGATCTGATGGTGCAGGTGGTGAAAGATCCGCTTGGCACTAAAGGTGCGCGCCTGACCACCGAT
TRN  10010101100011011
NAM  RNE_PORPU/31-111
ASQ  HYQVSDIYLGTVDKIFSgINAAF.VDLGK.NEYSGFIHISDTGPLKK........kYYINNITNILTIRQKILVQIIKEPTLNKGPRLTAN
DSQ  CATTATCAGGTAAGTGATATTTACTTAGGTACTGTAGATAAAATTTTTTCAggaATTAATGCAGCCTTC...GTTGATTTAGGGAAA...AATGAGTATAGTGGCTTTATTCATATAAGTGACACGGGTCCGTTAAAGAAA........................aaaTATTATATAAATAATATTACTAATATTTTAACGATCCGACAAAAAATATTAGTACAAATTATAAAAGAGCCAACCTTAAATAAAGGACCAAGATTAACTGCCAAT
TRN  10010101110011000
NAM  IF1_MYCSP/20-90
ASQ  KKEEVIKMTGKVTKMHS.-TKNYdVLLE-.NDQEIKAYISGKMSL--.........-----HNIKLIPGDMVDVEISPFNLTLGRIVFRHK
DSQ  AAAAAAGAAGAAGTTATTAAAATGACTGGTAAAGTAACCAAAATGCATTCA...---ACAAAAAATTATgatGTTTTACTAGAA---...AATGATCAAGAAATTAAAGCTTATATTTCTGGAAAAATGTCATTA------...........................---------------CATAATATCAAACTTATTCCCGGTGATATGGTTGATGTGGAAATCAGTCCTTTTAATTTAACATTAGGTAGAATAGTTTTTCGCCATAAA
TRN  10010101110011000
NAM  IF1C_EPIVI/1-71
ASQ  MKEQKWIHEGLITESLT.-NGMFwVRLD-.NKDLIIGYVSGNIRH--.........-----SFIRILPGDKVKIEVSRYNSTRGRIIYRLR
DSQ  ATGAAAGAACAAAAATGGATCCATGAAGGTTTAATTACTGAATCACTTACC...---AATGGCATGTTCtggGTTAGATTAGAT---...AATAAAGATCTTATTATAGGTTATGTTTCAGGAAATATCCGACAT------...........................---------------AGTTTTATACGGATCCTGCCTGGGGATAAAGTAAAAATAGAAGTAAGTCGTTATAATTCCACCAGAGGGCGTATAATTTATCGACTCCGA
TRN  10010101100011000
NAM  IF1C_PINTH/2-72
ASQ  KKQNLIHAEGLVTESLP.-NGMFrVLTD-.NGCQILTHISGRIRR--.........-----NSVRILPGDRVKVELSAYDLTKGRIIYRLS
DSQ  AAGAAACAGAATCTGATCCATGCGGAAGGTTTGGTTACTGAATCACTCCCC...---AACGGTATGTTTcgaGTTCTGACAGAT---...AATGGATGTCAGATTCTGACTCATATTTCGGGTAGGATTCGACGT------...........................---------------AATTCCGTACGAATACTACCAGGAGATAGGGTCAAGGTCGAATTAAGTGCTTATGATTTAACCAAAGGACGTATAATATATAGACTTAGC
TRN  10010101100011000
NAM  IF1_BACSU/1-71
ASQ  AKDDVIEVEGTIVETLP.-NAMFkVELE-.NGHTVLAHVSGKIRM--.........-----HFIRILPGDKVTVELSPYDLTRGRITYRYK
DSQ  GCGAAAGACGATGTAATTGAAGTGGAAGGTACTATAGTCGAAACACTGCCA...---AACGCGATGTTCaaaGTTGAACTTGAA---...AATGGCCACACTGTTTTGGCTCATGTATCTGGTAAAATCCGCATG------...........................---------------CACTTCATTCGCATTTTACCTGGAGACAAAGTTACGGTAGAATTATCTCCATATGACTTAACTCGTGGCAGGATTACGTACCGTTACAAA
TRN  10010101100011010
NAM  RNB_HAEIN/572-658
ASQ  KVASNAEFEAEVQDVMR.-AGLR.VQLLE.NGASLFIPAATLHNNKEeiqlnpdelALYIKGERTYKIGDMVKVKLTEVKEATRSIVGEIL
DSQ  AAAGTGGCATCAAATGCTGAATTTGAGGCGGAAGTGCAAGATGTAATGCGT...---GCAGGCTTACGC...GTACAACTGCTCGAA...AATGGTGCATCGCTATTTATTCCTGCCGCCACGCTGCACAACAACAAAGAAgaaatacaactaaaccctgacgaacttGCCCTCTATATAAAAGGCGAACGCACTTACAAAATAGGCGACATGGTAAAAGTGAAACTCACAGAAGTGAAAGAAGCCACACGCAGTATTGTGGGCGAAATACTT
TRN  10010101100011000
NAM  RNB_ECOLI/557-636
ASQ  KAGTDTRFAAEIVDISR.-GGMR.VRLVD.NGAIAFIPAPFLHAVRDe.......lVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETR
DSQ  AAAGCCGGGACCGACACCCGTTTCGCAGCGGAAATTGTCGATATCAGCCGT...---GGCGGCATGCGT...GTTCGTTTGGTTGAT...AACGGCGCTATCGCCTTTATTCCGGCACCTTTCTTACACGCTGTGCGCGATgaa.....................ctgGTTTGCAGCCAGGAAAACGGCACTGTACAAATTAAAGGTGAAACGGTTTACAAAGTGACTGACGTTATTGACGTCACTATTGCCGAAGTCCGCATGGAAACCCGC
TRN  11011101101011010
NAM  RPB7_YEAST/80-161
ASQ  KPFKGEVVDGTVVSCSQ.-HGFE.VQVG-.-PMKVFVTKHLMPQDLTfna..gsnpPSYQSSEDVITIKSRIRVKIEGCISQVS-SIHAIG
DSQ  AAACCATTTAAAGGGGAAGTAGTGGACGGCACAGTCGTTTCATGTTCTCAG...---CACGGGTTCGAA...GTGCAAGTAGGT---...---CCAATGAAAGTATTTGTGACAAAGCATCTGATGCCTCAAGATTTAACCtttaatgcg......ggttcaaacccaCCATCATACCAAAGTTCCGAGGATGTCATCACCATAAAAAGTAGAATTAGAGTTAAAATTGAAGGTTGTATCAGTCAAGTGAGT---TCTATCCACGCAATCGGT
TRN  10010101100011000
NAM  RPB7_RAT/78-161
ASQ  RPFKGEVVDAVVTQVNK.-VGLF.TEIG-.-PMSCFISRHSIPSEMEfdpnsnppcYKTMDEDIVIQQDDEIRLKIVGTRVDKN-DIFAIG
DSQ  CGGCCCTTTAAAGGGGAAGTGGTGGATGCTGTGGTCACTCAGGTCAACAAG...---GTTGGACTTTTC...ACAGAAATTGGG---...---CCCATGTCCTGCTTCATCTCTCGACACTCCATCCCTTCAGAGATGGAGtttgatccaaattcgaaccccccttgtTACAAGACCATGGATGAGGACATTGTAATTCAGCAGGACGATGAGATACGCTTGAAGATTGTAGGGACACGTGTAGACAAGAAT---GACATTTTTGCTATTGGC
TRN  10010101110011001
NAM  RPB7_ARATH/78-160
ASQ  RPFKGEILEAVVTLVNK.-MGFF.AEAG-.-PVQIFVSKHLIPDDMEfqag.dmpnYTTSDGSVKIQKECEVRLKIIGTRVDAT-AIFCVG
DSQ  AGACCTTTCAAAGGCGAGATTTTGGAAGCTGTTGTCACTTTGGTCAATAAG...---ATGGGATTCTTC...GCTGAAGCTGGC---...---CCTGTTCAGATTTTTGTGTCTAAGCATTTGATTCCAGATGATATGGAGtttcaagctgga...gacatgcctaacTATACCACATCAGATGGATCAGTTAAGATCCAGAAGGAGTGTGAAGTGAGACTAAAGATTATTGGAACAAGAGTTGATGCCACT---GCGATTTTTTGTGTGGGT
TRN  10010101110011001
//