PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam
 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF06888 alignment |
| Q9SU92_ARATH/4-236 | ATCGTGATATTATTTGATTTCGATCGGACTTTGATCGACGGAGATAGTGACAATTGGGTTGTCACTGAAATGGGACTCACAGAGATCTTCCATCAGCTCCGTTTCACTTTACCA---------TGGAATCGTCTTATGGATAGGATGATGATGGAGCTACAATCACAAGGT---AGATCGATTGATGACATTAAATCTTGTTTGAAGAAAATGCCTATTGATTCTCATATTATTGAAGCTATCAAATCAGCT------AAATCTTCAGGATGTGATTTAAAGATTGTGAGTGATGCAAATCAGTTTTTCATTGAGAAGATACTAGAGCACCATGATTTGGTGGATTGCTTTTCTGAG---ATTTACACAAATCCAACCTCTCTTGATGAT...AATGGGAACTTGCGGATCTTGCCTTATCATAGTGATGCATTGCCTCCACATAGC---TGCAATCTT...---TGCCCTTCAAATCTATGCAAGGGTTTAGTAATGGATCATTTACGTGCTTCTTCT...TCCAATGAT---CAAATTCCAAGAAGGTTTATCTACCTTGGAGATGGAGGAGGTGACTTCTGCCCGACATTGAAGCTGAGAGAGTGTGATTTTGTGATGCCGAGAACGAATTATCCGCTATGGAAGAAGATCTCAGAC------------AATCCCTTACTGATCAAAGCAGAAGTCAAGGAATGGAGTAGTGCAGAGGAACAACAGAGAATCCTGCTGCAACTTGTC |
| Q8W0E7_ORYSA/4-237 | ATCGTGGTGGTGTTCGACTTCGACAAGACGATCATCGACGTCGACAGCGACAACTGGGTCGTGGACGGGCTCGGCGCGACGGAGGAGTTCGAGCGGCTGCTGCCCACCATGCCG---------TGGAACACCCTCATGGACACCATGATGGGCGAGCTCCACGCGAGCGGC---AAGTCGCTCGCCGACGTCGCGGGCGTGCTCAGGTCGGCGCCGCTCGACCCGCGCGTCGTCGCCGCCATCAAGGCCTGC------TACGGCCTGGGCTGCGACCTCCGGATCCTCAGCGACGCCAACCGCTTCTTCATCGACACCATCCTCGACCACCACGGCCTCACGGGTTACTTCTCCGAG---ATCAACACCAACCCGAGCGCCGTCGACGCCgccACCGGCCGCCTCCGCATCGCGCCGTACCACGACTTCCACGCCGGCCCGCACGGG---TGCGGCCTCgggATCTGCCCGCCCAACATGTGCAAGGGCCAGGTGCTCGACCGCATCCGCGCCTCCGCC...---------GGCGCCGCCGGCAAGAGGGTCATCTACCTCGGTGACGGCCGCGGCGACTACTGCCCGTCGCTCCGCCTCGGCCGCGACGACTTCATGATGCCACGCAGGGGCTTCCCCGTGTGGGAGCTCATCTGCGAG------------GACCCGTCGCTGCTCCACGCGGAGGTGCACTCGTGGGCCGACGGCGCCGAGATGGAGGAGACGCTGCTGCGGCTGGTC |
| Q8LDK9_ARATH/12-245 | ATTGTCGTTGTTTTCGACTTCGACAAGACCATCATCGACGTTGATAGCGATAATTGGGTAATCGATGAACTTGGCTTCACTGATTTGTTCAATCAACTTCTCCCCACCATGCCT---------TGGAACACACTCATGGACCGTATGATGAAGGAGCTTCATGATCAAGGC---AAAACCATTGAGGAGATCAAACAAGTCTTGAGAACAATCCCAATTCATCCACGTGTCGTCCCTGCCATCAAATCTGCA------CATGATTTAGGGTGTGAGCTTAGGATAGTGAGCGATGCAAACATGTTTTTCATCGAGACCATCGTTGAACATCTCGGAATTAGCGAACTCTTCTCTGAG---ATCAACTCGAACCCAGGATATGTCGATGAA...CGTGGCACATTGAAAATCTCTCCCTACCACGACTTCACTAAATCCCCTCATAGC---TGCTCTTGTggcACTTGCCCTCCGAACATGTGCAAGGGTTTGATCATTGAGAGGATTCAACAATCTTTA...GCTAAAGAAGGGAAG------AAGAAAATGATCTATCTAGGAGATGGAGCTGGCGATTACTGTCCAAGTTTGAAACTAAACACTGAAGATTACGTGATGCCACGTAAGAATTTCCCTGTATGGGATCTAATTAGTCAA------------AATCCAATGCTGATTAAAGCAGTGATTAGAGAATGGACCGATGGCCAAAGCATGGAGATGATATTGATAGGAACGATC |
| Q8GRL8_LYCES/4-232 | ATTGTAGTGGTTTTCGACTTTGACAAGACAATTATCGACGTGGATAGTGATAATTGGGTGGTGGATGAATTAGGCGCCACTGATTTGTTCAATCAACTTCTCCCTACTATGCCA---------TGGAACTCTCTCATGGATAGAATGATGAAGGAGCTTCATACACAAGGC---AAAACAATACAAGACATTGAAGAGGTACTGAAACGGGTTCCCATACACCCTAGGATTGTTCCAGCTATTAAATCAGCT------CATGCATTAGGGTGTGATTTGAGAGTAATAAGCGATGCAAATGTATTCTTCATTGAAACAATATTGAAACATCTCGGAATTAGGGATTGTTTCTCAGAG---ATCAACACTAATCCAGGCTACGTCGATGGG...GAAGGCAGGCTTCGAATCCTTCCTTATGTTGATTTTCAAAAATCCCCTCATGGT---TGCAAT---...CTCTGCCCTCCCAACATGTGCAAGGGTATGATAGTAGAGAGAATTCAAGCTAAG---...------GAAGGGAAG------AAGAGAATGATTTATCTAGGCGATGGAATCGGCGATTTCTGCCCCAGTTTGAAGCTGAGGGAAGCAGATTTTGTGATGCCAAGAAAAGATTTCCCAGCCTGGAATTTGATAAATAAA------------AACAGGACACTAGTAAAAGCAGGGGTCCACGAGTGGACCAACGGCAAAGAACTTGAACACATTTTGCTACAATGGATC |
| Q8TCD6_HUMAN/3-239 | ATTTTGCTAGTTTTTGACTTTGACAATACAATCATAGATGACAATAGTGACACTTGGATTGTACAATGTGCTCCCAACAAAAAGCTTCCTATTGAACTACGTGATTCTTATCGAAAAGGATTTTGGACAGAATTTATGGGCAGAGTCTTTAAGTATTTGGGAGATAAGGGT---GTAAGAGAACATGAAATGAAAAGAGCAGTGACATCATTGCCTTTCACTCCAGGGATGGTGGAACTCTTCAACTTTATAAGAAAGAATAAGGATAAATTTGACTGCATTATTATTTCAGATTCAAATTCGGTCTTCATAGATTGGGTTTTAGAAGCTGCCAGTTTTCATGACATATTTGATAAA---GTGTTTACAAATCCAGCAGCTTTTAATAGC...AATGGTCATCTCACTGTTGAAAATTATCATACT---------------CATTCT---TGCAAT---...AGATGCCCAAAGAATCTTTGCAAAAAGGTAGTTTTGATAGAATTTGTAGATAAACAG...TTACAACAGGGAGTGAATTATACACAAATTGTTTATATTGGTGATGGTGGAAATGATGTCTGTCCAGTCACCTTTTTAAAGAATGATGATGTTGCCATGCCACGGAAAGGATATACCTTACAGAAAACTCTTTCCAGA---ATGTCTCAAAATCTTGAGCCTATGGAATATTCTGTTGTAGTTTGGTCCTCAGGTGTTGATATAATTTCTCATTTACAATTTCTAATA |
| Q8R2H9_MOUSE/27-264 | TTCCTCCTCACCTTCGACTTCGATGAGACCATCGTGGACGAGAACAGCGACGACTCGATCGTGCGTGCCGCGCCAGGCCAGCAACTGCCCGAGAGCCTGCGTGCCACCTATCGCGAGGGCTACTACAATGAGTACATGCAACGAGTCTTTAAGTACCTGGGTGAGCAGGGT---GTACGGCCCCGGGACCTGCGCGCTGTCTACGAGACCATCCCCCTGTCGCCAGGCATGGGCGATTTGTTGCAGTTCATAGCCAAACAGGGCTCCTGCTTCGAGGTTATTCTCATTTCGGATGCCAACACCTTCGGTGTGGAGAGTGCCCTGCGTGCCGCTGGCCACCACAGTTTATTCCGCCGC---ATCCTCAGCAACCCGTCGGGGCCCGACGCG...CGGGGACTGCTGACGCTGCGGCCCTTCCACACG---------------CACAGC---TGCTCG---...CGCTGCCCGGCCAACATGTGCAAGCACAAGGTGCTCAGCGAATACCTGCGTGAGCGG...GCCCGCGACGGCGTGCACTTCGAGCGCCTCTTCTACGTGGGTGATGGTGCAAATGACTTTTGCCCCATGGGGCTGCTGGCGGGCGGGGACGTGGCCTTCCCGCGCCGCGGCTACCCCATGCACCGCCTCATCCAGGAGGCACAGAAAGCTGAGCCCAGCTCCTTCCGCGCCCACGTGGTGCCCTGGGAAACAGCCGCCGATGTGCGCCAACATCTGCAACAGGTGCTG |
| O73884_CHICK/27-264 | TACCTCCTGGTCTTCGATTTTGATGGGACCATCATCAACGAGAGCAGTGATGACTCCATCGTGCGGGCAGCACCAGGGCAGGCACTGCCTGAGCACATCCGGCAGAGCTTCCGCGAGGGCTTCTACAATGAGTACATGCAGCGCGTCCTGGCCTACATGGGGGACCAGGGC---GTCAAGATGGGGGACTTCAAGGCTGTCTATGAGAACATTCCCCTGTCTCCGGGCATGCCTGACCTCTTCCAGTTCCTCTCCAAGAACCACGAGCTCTTCGAGATCATCCTCATCTCCGACGCCAACATGTTTGGCATTGAGTGCAAACTGAGGGCGGCCGGTTTTTACTCCCTCTTCCGCAAA---ATCTTCAGCAACCCGTCCAGCTTTGACAAG...AGGGGTTACTTCACCTTGGGGCCCTACCACAGC---------------CACAAG---TGCCTT---...GACTGCCCAGCCAACACGTGCAAGCGCAAAATCCTAACGGAGTACCTGGCCGAGAGA...GCGCAGGAAGAGGTGGAGTTCGAGAGGGTGTTTTACGTTGGGGATGGTGCCAATGACTTCTGCCCTTCGGTGACTTTGACTTCAGCTGACGTTGCTTTCCCTCGGAAGGGCTACCCCATGCACCAGATGACCCAGGAGATGGAGAAGAAGCAGCCTGGAACCTTCCAGGCCACCGTTGTTCCCTGGGAGTCGGCTACCGAGGTTGCCCGCTATCTGCAGGAGCTCCTC |
| Q9VWF0_DROME/28-264 | CGACTGGCGGCCTTCGACTTCGACCACACGATCGTTTCCCAGAACACGGACACCGTGGTGCGCGACCTGCTGCCCACGGAGGTGACGAGCGCCAAGGTCAACGAGCTGGTTGAAAACGACTGCTGGACGGAGTACATGGCCGAGGTGTTTCGCTTGCTGCACGAGCAACAG---GTGTCGGAGGCGCGCATTAGGGACACCATTCGTGGCATACCCGAGGTGCCCGGATTCGTGCGCCTGATCAAGCATCTGGCCAAG---CGGCTGCACTACGACCTGATCATCATCAGTGACTCGAACAGCGTCTTTATCGACGAGTGGCTGCGGGCACATAACTTGGCCGATTGCTTTGTGGCC---ATCTTTACCAATCCGGCGGAATTCGATGCC...TCCGGACGGCTTATGGTCCGCGCCCACCACCAG---------------CAGTCGGATTGCAAG---...CTGAGCGCCAGCAATTTGTGCAAGGGCCGCGTGCTGGAGCACTTTGTCATCGAGCAGgacCTGCGGCGCAGCATACGCTATGACCACGTCTTCTATGTGGGCGACGGCAACAACGACATCTGCCCCGTGCTGCGGCAGCGGGCGTGCGACTTTGCCTGCGCCCGCAAGGGGTTCGCAATGGAGAAGCACCTGCTCCGC------AATCGCAGCAAATTGAAGCTGCGCGCCCAGCTGCTGATCTGGAAGAGCGGCTTCGATCTGATGGACCAGATGCTGGCCCTGCCG |
| Q8T439_DROME/31-260 | ACCCTAGTCGCCATCGACTTCGACAGGACCATCGTTGAGCAGGACTCCTATTTGGCGGTGAGCCAACTACTGCCGACCAGTCAGCGC---AAGGAGCTGCAGGACCAGATCCCCAAGTGCGGCTGGCTGAGCTTCATAAGCCAAGTGTTGCAGCGCCTGCATGGCGAGCACAAGGTGAACTCCGCGTCGGTGGGCAAGCGTGTGCGCAGTCTCACAGCCGTGCCTGGAATGCTGCGGGTGATGCGCCGGTTAGCCCGGATCCCT---GAGCTCGAACTGTGCATCGTCAGCGACGCCAACTCCTTCTTCATCGACGAGTGGCTGCAGGCGTACGCCATTGAGTGCCTCTTTGCCGGCGGCGTGTTCACCAATCCCGCATGCGTCCAAGCG...AGCGGCGAACTGCTGGTGCTGCCCTACCAAGAG---------------CAGACTGACTGCGAT---...CTCTGCCCCTCCAACATGTGCAAGGGCTCCGTGATGGACGAGCTGACGTGCAGC---...---------GGG---CGATACGAGCGCTTGATCTATGTGGGCGATAGTTGCAACGATCTGTGCGCCATTAAGCGGCTGCGGCAAAAGGATGTCGCCTGCATCCGGCGCGGATTCGAGCTGCACGGTAAGATGACCGCC------------CATGGCCAGGAACTGGCCTGCTCCGTGCTCACATGGTGCGACGGCCACGAGCTGGAGGAGCTCCTGATGCCCAAAATC |