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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF02541 alignment
(9 sequences with 326 aa)

`Q9ZDN3_RICPR/16-282`	`VVYESDELG--.-----APEIFNYKFRNYLTNLLN----LDNLDVKHQTYLSIQYLIHVFTKLSV--TNIRCVATAILRGHPKADEFKTIIKKRFN-----IDIEIISGEREAYLTAAGLISGI--SDAFGIVADLGGGSLELAHIYN-----KKVGKLKSLPLGTKIIANSNFSDV--GLITKMLEEEFG-------VAHYPNLYLIGG----ALRLMSRIYMESINYPLKNLHN----------FEINRVEFELYLEKLSQID---------KLKLSYYEQKAINYNAVLVIKAMIKVFSPE-KIIISNYGLKEGVRFDSLPYH`
`Q9ZMF7_HELPJ/18-298`	`AVFKKTSQFG-.-FYLLFETKSKVRISEGCYAFKG----VLQEIPMQRAVKALSEFKEIALKYKS--KKILCVATSAVRDAPNRLEFVARVKKACG-----LQIKIIDGQKEALYG-GIACANL-LHKNSGITIDIGGGSTECALIEK-----GKIKDLISLDVGTIRIKEMFLDKD--LDVKLAKAFIQKEVSKL--PFKHKNAFGVGG----TIRALSKVLMKRFDYPIDSLHG----------YEIDAHKNLAFIEKIVMLK-----EDKLRLLGVNEERLDSIRSGALILSVVLEHLKTS-LMITSGVGVREGVFLSDLLRH`
`P96374_MYCTU/19-317`	`LIADVGAGLARgELHDVHRETRIVRLGQG-VDATG----RFAPEAIARTRTALTDYAELLTFHHA--ERVRMVATSAARDVVNRDVFFAMTADVLGAALPGSAAEVITGAEEAELSFRGAVGELGSAGAPFVVVDLGGGSTEIVLG-E-----HEVVASYSADIGCVRLTERCLHSD--PPTLQEVSTARRLVRER--LEPALRTVPLELAR-TWVGLAGTMTTLSALAQSMTAYDAAAIH----LSRVPGADLLEVCQRLIGMTR----KQRAALAPMHPGRADVIGGGAIVVEELARELRER-AGIDQLTVSEHDILDGIALSL`
`P74663_SYNY3/27-324`	`VIVRIDPVLAT.-FTIVAREKDTVRLGDR-DPQSN----NLTPAAMNRAIAALKRCVELAKGLEV--ENIIAVATSATREAKNGQDFLTRVQTEVG-----LTVDLISGPEEARRIYLGVFSCMDFHEVPHVMIDIGGGSTELILADR-----RDVRFLSSTKVGAVRLTQDFVHSD--PIDATELAVLRAYVRGM--LERPVDEIKQRLKGGEKAQMVGTSGTIETLATMTALQKQKEVPNPIQGYSISQKDVEEWVKKLAGLNC----QERFEVAGLSDRRAEIILPGAVILLEAMTMLELD-SITICERALREGMIVDWMLTH`
`O67040_AQUAE/24-309`	`TIAQIKDGK--.-LSIILERGRITSLGTK-VKETG----RLQEDRIEETIQVLKEYKKLIDEFKV--ERVKAVATEAIRRAKNAEEFLERVKREVG-----LVVEVITPEQEGRYAYLAVAYSL-KPEGEVCVVDQGGGSTEYVFGKG-----YKVREVISLPIGIVNLTETFFKQD--PPTEEEVKRFFEFLEKE--LSKVKKPVDTIVGLGGTITTLAALEYNVYPYDPQKVHG----------KVLTYGQIKKWFDTFKEIPS---EERSKRFRQVEDRRAKVILAGIGIFLKTLEIFEKD-CLIVSDWGLREGVLVSEVLKE`
`PPX_HAEIN/30-313`	`IVARIVNGS--.-IQVLSRLKQKVKLAEG-LDENA----VLNQEAITRGVNCLALFAERLQGFPM--ENVNVVGTYTLRRAVNNDEFLRQAAKVFP-----YPINIISGQTEAKTIYAGVCHTQ-PEKGRKLVIDIGGGSTEMIIGDD-----FTPLMAESRHMGCVSFATQFFTDG--IISPENFQRARQSAVNK--IEDLGLEYRKLG----WQSVLGSSGTIKTVAQVIATNLDP-------NGTITAERLNALIEQTLQAKH----FTELNINGLNQDRVDVFVPGLAILSAVFDVFHIQ-QMRYSDGALREGVIYSLEKNF`
`PPX_ECOLI/25-308`	`VIARVVDGA--.-MQIIGRLKQRVHLADG-LGPDN----MLSEEAMTRGLNCLSLFAERLQGFSP--ASVCIVGTHTLRQALNATDFLKRAEKVIP-----YPIEIISGNEEARLIFMGVEHTQ-PEKGRKLVIDIGGGSTELVIGEN-----FEPILVESRRMGCVSFAQLYFPGG--VINKENFQRARMAAAQK--LETLTWQFRIQG----WNVAMGASGTIKAAHEVLMEMGEK-------DGIITPERLEKLVKEVLRHRN----FASLSLPGLSEERKTVFVPGLAILCGVFDALAIR-ELRLSDGALREGVLYEMEGRF`
`GPPA_ECOLI/21-303`	`LVVREVAGS--.-IQTLTRIKRKVRLAAG-LNSEN----ALSNEAMERGWQCLRLFAERLQDIPP--SQIRVVATATLRLAVNAGDFIAKAQEILG-----CPVQVISGEEEARLIYQGVAHTTGGADQR-LVVDIGGASTELVTGTG-----AQTTSLFSLSMGCVTWLERYFADR--NLGQENFDAAEKAAREV--LRPVADELRYHG----WKVCVGASGTVQALQEIMMAQG-M-------DERITLEKLQQLKQRAIHCGR----LEELEIDGLTLERALVFPSGLAILIAIFTELNIQ-CMTLAGGALREGLVYGMLHLA`
`RTG2_YEAST/32-346`	`SISSKAAHHAR.IMPCVFKDRVGLSLYEVQYNTHTNAKCPIPRDIIKEVCSAMKRFKLICDDFGVPETSVRVIATEATRDAINADEFVNAVYGSTG-----WKVEILGQEDETRVGIYGVVSSF--NTVRGLYLDVAGGSTQLSWVISSHGEVKQSSKPVSLPYGAGTLLRRMRTDDNRALFYEIKEAYKDAIEKIGIPQEMIDDAKKEGGFDLWTRGGGLRGMGHLLLYQSEGYPIQTIIN---GYACTYEEFSSMSDYLFLKQKIPGSSKEHKIFKVSDRRALQLPAVGLFMSAVFEAIPQIKAVHFSEGGVREGSLYSLLPKE`