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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF01833 phylogeny |
| ((((((((((((((((NFC4_HUMAN/586-684,NFC3_HUMAN/600-698),NFC1_HUMAN/596-694),(NFC2_MOUSE/580-678,((G13B_DICDI/504-592,O15742_DICDI/386-474),O96070_DICDI/504-592))),((RELB_XENLA/256-351,(((TF65_MOUSE/194-289,(REL_AVIRE/194-288,(REL_MOUSE/186-280,TF65_XENLA/194-289))),TF65_CHICK/199-294),((KBF1_MOUSE/248-348,(KBF2_CHICK/227-325,((Q17034_ANOGA/227-327,DORS_DROME/225-325),DIF_DROME/255-356))),O96458_STRPU/258-359))),(RELB_CHICK/316-411,RELB_HUMAN/303-398))),(LAGC_DICDI/120-208,((RBPSL_HUMAN/386-475,(SUH_DROME/429-519,(SUH_HALRO/386-476,(SUH_MOUSE/381-471,Q14663_HUMAN/275-365)))),Q9TYY1_CAEEL/563-659))),((O13987_SCHPO/658-740,((SPT23_YEAST/508-585,MGA2_YEAST/530-610),O94057_CANAL/399-485)),UNC3_CAEEL/269-356)),(Q00876_RENSA/151-234,Q00876_RENSA/238-320)),(O96681_DROME/978-1063,(P70003_XENLA/750-838,(((PLXB1_HUMAN/1252-1375,O45657_CAEEL/926-1020),((O96682_DROME/1097-1193,(Q91823_XENLA/1038-1137,P70207_MOUSE/1031-1130)),O96681_DROME/1075-1185)),((MET_RAT/743-837,Q90975_CHICK/743-837),Q9YGM7_FUGRU/755-849))))),(((MET_MOUSE/656-738,Q90975_CHICK/657-740),Q9YGM7_FUGRU/669-752),((O45657_CAEEL/838-923,(Q08757_CHICK/686-772,((RON_MOUSE/686-769,RON_HUMAN/684-767),P70003_XENLA/661-747))),(Q9YGM5_FUGRU/657-745,Q9YGN0_FUGRU/660-748)))),((P70208_MOUSE/936-1021,(Q91823_XENLA/951-1035,P70206_MOUSE/959-1043)),O75051_HUMAN/1023-1107)),(LAGC_DICDI/293-380,(((((RON_MOUSE/772-864,RON_HUMAN/770-860),Q08757_CHICK/775-864),(Q9YGM5_FUGRU/748-843,Q9YGN0_FUGRU/751-843)),O94983_HUMAN/565-647),(O60486_HUMAN/664-751,(O60486_HUMAN/754-841,(O75051_HUMAN/1212-1305,Q91823_XENLA/1140-1226)))))),(((AMYM_BACST/532-610,((CDGT_BACOH/520-600,CDGT_BACST/526-606),((CDGT1_PAEMA/527-607,CDGT_THETU/526-603),(CDGT1_BACCI/532-614,(CDGT2_BACCI/526-609,CDGT_BACS3/526-608))))),(O06841_PREBR/216-297,O06841_PREBR/298-375)),((CSA_DICDI/191-283,(SEC5_CAEEL/13-98,SEC5_RAT/8-93)),CSA_DICDI/21-104))),(Q9YGM7_FUGRU/572-667,((P70207_MOUSE/848-942,(O45657_CAEEL/748-836,O51546_BORBU/34-113)),(PLXB1_HUMAN/1070-1160,O96681_DROME/885-976)))),(MET_MOUSE/562-654,Q90975_CHICK/563-652)),(((Q9YGM5_FUGRU/552-644,Q9YGN0_FUGRU/555-647),P70003_XENLA/549-648),Q08757_CHICK/564-673)),RON_HUMAN/569-671,RON_MOUSE/571-673); |
| ((((((((((((((((NFC4_HUMAN/586-684:0.41246,NFC3_HUMAN/600-698:0.30842):0.22402,NFC1_HUMAN/596-694:0.19580):0.13152,(NFC2_MOUSE/580-678:0.05476,((G13B_DICDI/504-592:0.24908,O15742_DICDI/386-474:0.09499):0.21856,O96070_DICDI/504-592:0.01263):2.17299):0.36641):0.36543,((RELB_XENLA/256-351:0.30732,(((TF65_MOUSE/194-289:0.12685,(REL_AVIRE/194-288:0.08934,(REL_MOUSE/186-280:0.07686,TF65_XENLA/194-289:0.26467):0.11996):0.21492):0.09826,TF65_CHICK/199-294:0.24004):0.24443,((KBF1_MOUSE/248-348:0.14991,(KBF2_CHICK/227-325:0.28303,((Q17034_ANOGA/227-327:0.42455,DORS_DROME/225-325:0.21958):0.31734,DIF_DROME/255-356:0.27804):0.29075):0.19854):0.06571,O96458_STRPU/258-359:0.26279):0.22868):0.08138):0.03974,(RELB_CHICK/316-411:0.20189,RELB_HUMAN/303-398:0.15485):0.11205):0.69126):0.44081,(LAGC_DICDI/120-208:1.33880,((RBPSL_HUMAN/386-475:0.45302,(SUH_DROME/429-519:0.16414,(SUH_HALRO/386-476:0.17890,(SUH_MOUSE/381-471:0.01162,Q14663_HUMAN/275-365:0.43276):0.10474):0.02677):0.02356):0.35830,Q9TYY1_CAEEL/563-659:0.28383):1.01157):0.20719):0.29928,((O13987_SCHPO/658-740:0.33966,((SPT23_YEAST/508-585:0.29120,MGA2_YEAST/530-610:0.26694):0.21346,O94057_CANAL/399-485:0.16190):0.58476):0.24650,UNC3_CAEEL/269-356:0.85668):0.25545):0.20688,(Q00876_RENSA/151-234:0.37225,Q00876_RENSA/238-320:0.18111):0.65092):0.32408,(O96681_DROME/978-1063:0.80358,(P70003_XENLA/750-838:0.80533,(((PLXB1_HUMAN/1252-1375:0.46899,O45657_CAEEL/926-1020:0.86397):0.30650,((O96682_DROME/1097-1193:0.81828,(Q91823_XENLA/1038-1137:0.34655,P70207_MOUSE/1031-1130:0.35334):0.55808):0.15336,O96681_DROME/1075-1185:0.93647):0.29563):0.18073,((MET_RAT/743-837:0.24932,Q90975_CHICK/743-837:0.32586):0.25264,Q9YGM7_FUGRU/755-849:0.82841):0.37756):0.07514):0.18653):0.11300):0.03027,(((MET_MOUSE/656-738:0.29716,Q90975_CHICK/657-740:0.28444):0.17730,Q9YGM7_FUGRU/669-752:0.66214):0.17734,((O45657_CAEEL/838-923:0.69122,(Q08757_CHICK/686-772:0.65106,((RON_MOUSE/686-769:0.16409,RON_HUMAN/684-767:0.15284):0.43024,P70003_XENLA/661-747:0.64173):0.18542):0.15974):0.21558,(Q9YGM5_FUGRU/657-745:0.43219,Q9YGN0_FUGRU/660-748:0.51609):0.37458):0.11927):0.18591):0.08837,((P70208_MOUSE/936-1021:0.49002,(Q91823_XENLA/951-1035:0.20604,P70206_MOUSE/959-1043:0.19540):0.36723):0.14864,O75051_HUMAN/1023-1107:0.66539):0.30371):0.15517,(LAGC_DICDI/293-380:0.77063,(((((RON_MOUSE/772-864:0.15197,RON_HUMAN/770-860:0.16595):0.78781,Q08757_CHICK/775-864:0.67442):0.54604,(Q9YGM5_FUGRU/748-843:0.47621,Q9YGN0_FUGRU/751-843:0.49470):0.45149):0.43333,O94983_HUMAN/565-647:1.23094):0.08126,(O60486_HUMAN/664-751:0.94395,(O60486_HUMAN/754-841:1.38434,(O75051_HUMAN/1212-1305:0.39413,Q91823_XENLA/1140-1226:0.17487):0.78158):0.00000):0.28580):0.24430):0.09186):0.16795,(((AMYM_BACST/532-610:0.53317,((CDGT_BACOH/520-600:0.44227,CDGT_BACST/526-606:0.24733):0.06622,((CDGT1_PAEMA/527-607:0.23910,CDGT_THETU/526-603:0.35504):0.17436,(CDGT1_BACCI/532-614:0.21330,(CDGT2_BACCI/526-609:0.00000,CDGT_BACS3/526-608:0.25957):0.13436):0.07620):0.09911):0.22142):0.52111,(O06841_PREBR/216-297:0.91047,O06841_PREBR/298-375:0.53412):0.31372):0.21045,((CSA_DICDI/191-283:0.90623,(SEC5_CAEEL/13-98:0.39742,SEC5_RAT/8-93:0.25332):0.73664):0.08922,CSA_DICDI/21-104:1.18072):0.05004):0.06518):0.36288,(Q9YGM7_FUGRU/572-667:0.72043,((P70207_MOUSE/848-942:0.62340,(O45657_CAEEL/748-836:0.44829,O51546_BORBU/34-113:1.34657):0.41789):0.17739,(PLXB1_HUMAN/1070-1160:0.76717,O96681_DROME/885-976:0.66205):0.19444):0.32446):0.24866):0.25595,(MET_MOUSE/562-654:0.40859,Q90975_CHICK/563-652:0.49960):0.23000):0.60300,(((Q9YGM5_FUGRU/552-644:0.36808,Q9YGN0_FUGRU/555-647:0.44985):0.39373,P70003_XENLA/549-648:0.74512):0.27000,Q08757_CHICK/564-673:0.59569):0.13878):0.54734,RON_HUMAN/569-671:0.17465,RON_MOUSE/571-673:0.08783); |