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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF00385 phylogeny |
| (((((((((((((Q9N6U0_LEPDE/149-201,Q9N6U2_CLYAR/146-198),(Q7PDQ5_PLAYO/58-115,((O49137_ARATH/339-395,(Q94F88_ARATH/382-438,((Q8H0H2_TOBAC/292-348,(Q7XHF1_ORYSA/415-469,Q8LPU5_MAIZE/445-499)),(Q8H854_ORYSA/558-614,(O49415_ARATH/786-839,Q94F87_ARATH/786-842))))),Q9N6T8_9NEOP/139-189))),(((((Q6R662_MELLI/1290-1340,(Q6BG04_PARTE/15-61,(((O77159_TETTH/5-54,CHP1_SCHPO/22-73),Q25732_PLAFA/8-54),Q8MTK2_PODCA/12-61))),(Q9NHC4_TETTH/17-69,Q94996_TETTH/49-101)),(((Q7YRP9_PANTR/2-53,(Q6AYK9_RAT/55-106,Q7TQ22_MOUSE/7-57)),Q22430_CAEEL/34-83),Q7TP67_RAT/867-917)),Q8SWP7_ENCCU/216-268),((CLR4_SCHPO/8-60,Q9VX35_DROME/233-282),(YNZ8_CAEEL/24-75,Q9ZS84_LYCES/1467-1522)))),(((SUV9_DROME/219-268,Q9HFY7_COLGL/1130-1181),Q6A1N8_EUPVA/14-64),((Q6RYC6_ASPFL/1931-1981,Q9UVC1_CLAFU/1166-1212),(((SUV91_HUMAN/43-92,Q6NRE8_XENLA/46-95),Q8BNK2_MOUSE/118-167),Q6DGD3_BRARE/43-92)))),((Q7SD03_NEUCR/272-334,(((O42934_SCHPO/176-229,SWI6_SCHPO/81-134),Q19972_CAEEL/87-138),Q8SSD0_ENCCU/7-56)),(CEC1_CAEEL/8-57,(Q9VHG0_DROME/27-76,O93284_FUGRU/1125-1174)))),((((((Q68YT0_9AGAR/427-482,Q7S076_NEUCR/350-399),Q6BDL4_TRIMT/6-55),Q6TAS1_PHACH/90-141),((Q7RYZ6_NEUCR/517-572,Q9V856_DROME/22-72),Q9V855_DROME/24-74)),((HP1_DROME/24-73,((CBX5_MOUSE/20-69,(O42156_XENLA/17-66,O93480_CHICK/21-70)),Q7QKG5_ANOGA/31-80)),(((Q95SE0_DROME/4-53,Q9VCU6_DROME/8-58),(((((Q944N1_LYCES/93-143,Q946J8_ARATH/108-158),O65791_DAUCA/55-105),Q8LK11_MAIZE/66-116),(((CBX2_MOUSE/12-61,CBX4_HUMAN/11-60),CBX7_HUMAN/11-60),(PC_DROME/26-75,(CBX6_HUMAN/11-60,CBX8_HUMAN/11-60)))),((Q84UZ2_CHLRE/116-176,(Q7PVD0_ANOGA/244-296,Q6WRI8_DROTK/221-273)),((O22265_ARATH/320-368,Q8LSQ2_ORYSA/321-370),O22265_ARATH/270-316)))),(O17916_CAEEL/19-69,Q21370_CAEEL/37-86)))),(Q6URR3_MAGGR/63-117,Q6URR4_NEUCR/76-129))),(((Q7SEE0_NEUCR/421-476,Q8WZR8_NEUCR/43-92),(Q7S6R0_NEUCR/211-267,Q9UVD8_ALTAL/1191-1242)),Q7SGQ3_NEUCR/206-258)),(((Q8BIE8_MOUSE/291-353,(Q6DTK9_HUMAN/690-752,CHD7_HUMAN/38-100)),O15725_DICDI/978-1023),Q9S775_ARATH/98-158)),((((Q19815_CAEEL/489-541,((CHD3_HUMAN/631-683,CHD4_HUMAN/622-674),Q6ZSZ4_HUMAN/592-644)),((CHD3_DROME/179-231,(Q7PZN7_ANOGA/598-650,CHDM_DROME/612-664)),HRP1_SCHPO/207-267)),((Q9SI41_ARATH/533-588,(Q6YNJ5_ORYSA/202-253,(Q9S775_ARATH/190-240,Q9SZ57_ARATH/142-192))),(((((CHD1_HUMAN/389-443,CHD2_HUMAN/378-447),(Q7Q8C2_ANOGA/218-273,Q24376_DROME/439-492)),O17909_CAEEL/310-365),(Q7SD03_NEUCR/372-423,O48579_ARATH/587-640)),(((Q6CDI0_YARLI/206-262,O61845_CAEEL/1104-1153),(Q6BI94_DEBHA/265-320,(Q6CSV4_KLULA/294-352,CHD1_YEAST/285-341))),(HRP3_SCHPO/288-340,HRP1_SCHPO/304-356))))),(((Q8BIE8_MOUSE/374-428,Q6DTK9_HUMAN/773-827),Q9VPL9_DROME/1940-1994),CHD7_HUMAN/120-173))),(((Q7FAB6_ORYSA/284-334,Q9ZVK3_ARATH/887-942),(((Q8SA93_MAIZE/1791-1841,((Q7XGR5_ORYSA/321-371,Q7XKR1_ORYSA/497-547),(Q8GZY7_ORYSA/1404-1454,(Q7XSK7_ORYSA/1356-1406,((Q7X7I2_ORYSA/1324-1374,Q7XFZ5_ORYSA/1377-1427),Q947Y6_ORYSA/1363-1413))))),(((Q9XIG5_ARATH/1144-1195,Q9LP90_ARATH/1332-1383),Q9SQW9_ARATH/1566-1618),Q84ZV5_SOYBN/1441-1495)),(((Q7XPW2_ORYSA/1476-1530,((Q7XQY0_ORYSA/729-783,(Q7XGG9_ORYSA/859-913,Q8H7X5_ORYSA/320-374)),Q7XW39_ORYSA/1531-1585)),Q8SA91_MAIZE/1489-1543),(((((Q7XL81_ORYSA/929-983,Q7Y022_ORYSA/5-42),Q7F9M4_ORYSA/882-932),((Q7XP97_ORYSA/2779-2816,Q947Y5_ORYSA/923-977),(((Q7XW92_ORYSA/1293-1347,Q9FW76_ORYSA/1486-1540),(Q7XQR1_ORYSA/393-447,Q7XW82_ORYSA/1557-1611)),(Q7XVW4_ORYSA/1065-1119,Q7X7Y2_ORYSA/1513-1567)))),(((Q7G672_ORYSA/378-432,Q7G671_ORYSA/943-997),Q7XFW2_ORYSA/987-1041),(Q7XFF7_ORYSA/400-454,((Q852F5_ORYSA/1082-1136,Q8S7F8_ORYSA/340-394),Q94GF6_ORYSA/311-365)))),Q7Y006_ORYSA/1027-1081)))),(((Q6F2D6_SOLDE/1714-1766,Q6L3Q3_SOLDE/779-831),Q6L3S2_SOLDE/1546-1601),(O81490_ARATH/1267-1318,((((Q6UU73_ORYSA/1971-2023,Q7XNT1_ORYSA/624-679),(Q6ASR4_ORYSA/1439-1491,Q69MZ1_ORYSA/1559-1611)),((Q9XE68_SORBI/869-924,Q8W1D1_MAIZE/1417-1469),(Q6MWG4_ORYSA/661-713,Q75H53_ORYSA/791-843))),Q8S6Z7_ORYSA/185-239))))),(((Q6CFS2_YARLI/850-902,Q7S0E4_NEUCR/843-895),O42765_CANAL/934-986),ELF1_SCHPO/820-872)),(O48579_ARATH/517-573,Q6BI94_DEBHA/166-228)),Q7RM86_PLAYO/825-879,Q8IJG6_PLAF7/1203-1257); |
| (((((((((((((Q9N6U0_LEPDE/149-201:0.14562,Q9N6U2_CLYAR/146-198:0.26957):0.27185,(Q7PDQ5_PLAYO/58-115:0.34880,((O49137_ARATH/339-395:0.43500,(Q94F88_ARATH/382-438:0.30904,((Q8H0H2_TOBAC/292-348:0.27344,(Q7XHF1_ORYSA/415-469:0.12568,Q8LPU5_MAIZE/445-499:0.13465):0.18212):0.04617,(Q8H854_ORYSA/558-614:0.20244,(O49415_ARATH/786-839:0.17441,Q94F87_ARATH/786-842:0.05893):0.30110):0.05701):0.07374):0.05253):0.17707,Q9N6T8_9NEOP/139-189:0.26929):0.02691):0.09273):0.04305,(((((Q6R662_MELLI/1290-1340:0.36654,(Q6BG04_PARTE/15-61:0.46554,(((O77159_TETTH/5-54:0.35873,CHP1_SCHPO/22-73:0.26426):0.10285,Q25732_PLAFA/8-54:0.26071):0.07404,Q8MTK2_PODCA/12-61:0.37228):0.03873):0.04431):0.15962,(Q9NHC4_TETTH/17-69:0.18127,Q94996_TETTH/49-101:0.38801):0.07307):0.04648,(((Q7YRP9_PANTR/2-53:0.12541,(Q6AYK9_RAT/55-106:0.10176,Q7TQ22_MOUSE/7-57:0.24540):0.08870):0.16027,Q22430_CAEEL/34-83:0.59403):0.07125,Q7TP67_RAT/867-917:0.27785):0.09697):0.02691,Q8SWP7_ENCCU/216-268:0.51361):0.05767,((CLR4_SCHPO/8-60:0.51194,Q9VX35_DROME/233-282:0.36057):0.14563,(YNZ8_CAEEL/24-75:0.28060,Q9ZS84_LYCES/1467-1522:0.47863):0.08696):0.11695):0.05881):0.21475,(((SUV9_DROME/219-268:0.35552,Q9HFY7_COLGL/1130-1181:0.30957):0.09439,Q6A1N8_EUPVA/14-64:0.34595):0.13670,((Q6RYC6_ASPFL/1931-1981:0.28907,Q9UVC1_CLAFU/1166-1212:0.24399):0.06174,(((SUV91_HUMAN/43-92:0.21392,Q6NRE8_XENLA/46-95:0.19797):0.08104,Q8BNK2_MOUSE/118-167:0.21597):0.04529,Q6DGD3_BRARE/43-92:0.19845):0.20475):0.11839):0.02523):0.08558,((Q7SD03_NEUCR/272-334:0.45937,(((O42934_SCHPO/176-229:0.24477,SWI6_SCHPO/81-134:0.31913):0.14075,Q19972_CAEEL/87-138:0.45274):0.11651,Q8SSD0_ENCCU/7-56:0.31816):0.11705):0.06021,(CEC1_CAEEL/8-57:0.34735,(Q9VHG0_DROME/27-76:0.33810,O93284_FUGRU/1125-1174:0.49145):0.14616):0.13238):0.09560):0.07393,((((((Q68YT0_9AGAR/427-482:0.45393,Q7S076_NEUCR/350-399:0.49266):0.06941,Q6BDL4_TRIMT/6-55:0.43039):0.10501,Q6TAS1_PHACH/90-141:0.42307):0.18042,((Q7RYZ6_NEUCR/517-572:0.41235,Q9V856_DROME/22-72:0.23634):0.07979,Q9V855_DROME/24-74:0.21303):0.17121):0.05920,((HP1_DROME/24-73:0.23280,((CBX5_MOUSE/20-69:0.25889,(O42156_XENLA/17-66:0.27752,O93480_CHICK/21-70:0.04756):0.05638):0.11388,Q7QKG5_ANOGA/31-80:0.20717):0.03526):0.07957,(((Q95SE0_DROME/4-53:0.24661,Q9VCU6_DROME/8-58:0.20989):0.11979,(((((Q944N1_LYCES/93-143:0.32047,Q946J8_ARATH/108-158:0.14087):0.13106,O65791_DAUCA/55-105:0.09506):0.11158,Q8LK11_MAIZE/66-116:0.20756):0.26742,(((CBX2_MOUSE/12-61:0.17205,CBX4_HUMAN/11-60:0.09369):0.07440,CBX7_HUMAN/11-60:0.13409):0.08070,(PC_DROME/26-75:0.26918,(CBX6_HUMAN/11-60:0.13687,CBX8_HUMAN/11-60:0.12693):0.13372):0.02051):0.08331):0.08183,((Q84UZ2_CHLRE/116-176:0.72686,(Q7PVD0_ANOGA/244-296:0.24091,Q6WRI8_DROTK/221-273:0.29599):0.10623):0.08707,((O22265_ARATH/320-368:0.45680,Q8LSQ2_ORYSA/321-370:0.13464):0.12854,O22265_ARATH/270-316:0.46592):0.17275):0.08289):0.01960):0.04950,(O17916_CAEEL/19-69:0.16177,Q21370_CAEEL/37-86:0.26792):0.26628):0.00940):0.03847):0.02402,(Q6URR3_MAGGR/63-117:0.24218,Q6URR4_NEUCR/76-129:0.32878):0.20313):0.03465):0.09361,(((Q7SEE0_NEUCR/421-476:0.40196,Q8WZR8_NEUCR/43-92:0.27338):0.08920,(Q7S6R0_NEUCR/211-267:0.34990,Q9UVD8_ALTAL/1191-1242:0.55307):0.19092):0.04880,Q7SGQ3_NEUCR/206-258:0.39499):0.07533):0.16541,(((Q8BIE8_MOUSE/291-353:0.34767,(Q6DTK9_HUMAN/690-752:0.23722,CHD7_HUMAN/38-100:0.23194):0.20306):0.29267,O15725_DICDI/978-1023:0.39317):0.13332,Q9S775_ARATH/98-158:0.37791):0.18722):0.04348,((((Q19815_CAEEL/489-541:0.34961,((CHD3_HUMAN/631-683:0.20611,CHD4_HUMAN/622-674:0.16132):0.09174,Q6ZSZ4_HUMAN/592-644:0.17288):0.22219):0.15672,((CHD3_DROME/179-231:0.40146,(Q7PZN7_ANOGA/598-650:0.28531,CHDM_DROME/612-664:0.07496):0.16286):0.11420,HRP1_SCHPO/207-267:0.56471):0.07798):0.19119,((Q9SI41_ARATH/533-588:0.37701,(Q6YNJ5_ORYSA/202-253:0.21881,(Q9S775_ARATH/190-240:0.16920,Q9SZ57_ARATH/142-192:0.13890):0.19223):0.18158):0.07197,(((((CHD1_HUMAN/389-443:0.21094,CHD2_HUMAN/378-447:0.36436):0.15494,(Q7Q8C2_ANOGA/218-273:0.34502,Q24376_DROME/439-492:0.23187):0.20714):0.14743,O17909_CAEEL/310-365:0.33668):0.07933,(Q7SD03_NEUCR/372-423:0.28502,O48579_ARATH/587-640:0.57481):0.14847):0.02645,(((Q6CDI0_YARLI/206-262:0.19384,O61845_CAEEL/1104-1153:0.58665):0.08199,(Q6BI94_DEBHA/265-320:0.42913,(Q6CSV4_KLULA/294-352:0.18904,CHD1_YEAST/285-341:0.24907):0.19411):0.05174):0.08975,(HRP3_SCHPO/288-340:0.40354,HRP1_SCHPO/304-356:0.24883):0.14833):0.05800):0.11879):0.13014):0.09321,(((Q8BIE8_MOUSE/374-428:0.25815,Q6DTK9_HUMAN/773-827:0.26453):0.02217,Q9VPL9_DROME/1940-1994:0.34814):0.15971,CHD7_HUMAN/120-173:0.15297):0.21817):0.07647):0.08509,(((Q7FAB6_ORYSA/284-334:0.59746,Q9ZVK3_ARATH/887-942:0.48349):0.15759,(((Q8SA93_MAIZE/1791-1841:0.31833,((Q7XGR5_ORYSA/321-371:0.16420,Q7XKR1_ORYSA/497-547:0.13844):0.13999,(Q8GZY7_ORYSA/1404-1454:0.23078,(Q7XSK7_ORYSA/1356-1406:0.19394,((Q7X7I2_ORYSA/1324-1374:0.32190,Q7XFZ5_ORYSA/1377-1427:0.09808):0.15368,Q947Y6_ORYSA/1363-1413:0.17916):0.05947):0.10795):0.07705):0.10597):0.11934,(((Q9XIG5_ARATH/1144-1195:0.39161,Q9LP90_ARATH/1332-1383:0.40004):0.03591,Q9SQW9_ARATH/1566-1618:0.41071):0.12875,Q84ZV5_SOYBN/1441-1495:0.39826):0.00836):0.08631,(((Q7XPW2_ORYSA/1476-1530:0.21873,((Q7XQY0_ORYSA/729-783:0.21050,(Q7XGG9_ORYSA/859-913:0.14070,Q8H7X5_ORYSA/320-374:0.18078):0.06601):0.03069,Q7XW39_ORYSA/1531-1585:0.20510):0.13996):0.10363,Q8SA91_MAIZE/1489-1543:0.43537):0.07416,(((((Q7XL81_ORYSA/929-983:0.20265,Q7Y022_ORYSA/5-42:0.30792):0.09906,Q7F9M4_ORYSA/882-932:0.35214):0.03358,((Q7XP97_ORYSA/2779-2816:0.26887,Q947Y5_ORYSA/923-977:0.11177):0.09793,(((Q7XW92_ORYSA/1293-1347:0.14398,Q9FW76_ORYSA/1486-1540:0.19737):0.13718,(Q7XQR1_ORYSA/393-447:0.17637,Q7XW82_ORYSA/1557-1611:0.17229):0.03286):0.04314,(Q7XVW4_ORYSA/1065-1119:0.24741,Q7X7Y2_ORYSA/1513-1567:0.18797):0.05783):0.05341):0.04775):0.10940,(((Q7G672_ORYSA/378-432:0.11803,Q7G671_ORYSA/943-997:0.27128):0.06248,Q7XFW2_ORYSA/987-1041:0.27038):0.18577,(Q7XFF7_ORYSA/400-454:0.30200,((Q852F5_ORYSA/1082-1136:0.13866,Q8S7F8_ORYSA/340-394:0.15488):0.12462,Q94GF6_ORYSA/311-365:0.22122):0.06301):0.08580):0.03458):0.00000,Q7Y006_ORYSA/1027-1081:0.35294):0.05763):0.33013):0.06102):0.06601,(((Q6F2D6_SOLDE/1714-1766:0.28391,Q6L3Q3_SOLDE/779-831:0.14500):0.14706,Q6L3S2_SOLDE/1546-1601:0.28924):0.08167,(O81490_ARATH/1267-1318:0.57081,((((Q6UU73_ORYSA/1971-2023:0.11257,Q7XNT1_ORYSA/624-679:0.35640):0.02565,(Q6ASR4_ORYSA/1439-1491:0.15495,Q69MZ1_ORYSA/1559-1611:0.17156):0.07309):0.12567,((Q9XE68_SORBI/869-924:0.39225,Q8W1D1_MAIZE/1417-1469:0.19940):0.06165,(Q6MWG4_ORYSA/661-713:0.27811,Q75H53_ORYSA/791-843:0.21567):0.11274):0.07741):0.00000,Q8S6Z7_ORYSA/185-239:0.43504):0.24408):0.06705):0.31659):0.33222):0.26209,(((Q6CFS2_YARLI/850-902:0.18574,Q7S0E4_NEUCR/843-895:0.27223):0.26585,O42765_CANAL/934-986:0.28775):0.05786,ELF1_SCHPO/820-872:0.17755):0.31422):0.11805,(O48579_ARATH/517-573:0.53290,Q6BI94_DEBHA/166-228:0.33242):0.14114):0.46733,Q7RM86_PLAYO/825-879:0.05247,Q8IJG6_PLAF7/1203-1257:0.18142); |