Dbfetch
LOCUS NM_001267177 1022 bp mRNA linear INV 18-OCT-2019
DEFINITION Caenorhabditis elegans Fork-head domain-containing protein (fkh-8),
partial mRNA.
ACCESSION NM_001267177
VERSION NM_001267177.2
DBLINK BioProject: PRJNA158
BioSample: SAMEA3138177
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1022)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1022)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (16-OCT-2019) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1022)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2019) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1022)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003280).
On Sep 4, 2019 this sequence version replaced NM_001267177.1.
COMPLETENESS: incomplete on the 5' end.
FEATURES Location/Qualifiers
source 1..1022
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="II"
gene <1..1022
/gene="fkh-8"
/locus_tag="CELE_F40H3.4"
/db_xref="GeneID:174026"
/db_xref="WormBase:WBGene00001440"
CDS 1..933
/gene="fkh-8"
/locus_tag="CELE_F40H3.4"
/standard_name="F40H3.4a"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Fork-head domain-containing protein"
/protein_id="NP_001254106.1"
/db_xref="EnsemblGenomes-Gn:WBGene00001440"
/db_xref="EnsemblGenomes-Tr:F40H3.4a"
/db_xref="GeneID:174026"
/db_xref="GOA:Q9TZK1"
/db_xref="InterPro:IPR001766"
/db_xref="InterPro:IPR018122"
/db_xref="InterPro:IPR030456"
/db_xref="InterPro:IPR036388"
/db_xref="InterPro:IPR036390"
/db_xref="UniProtKB/TrEMBL:Q9TZK1"
/db_xref="WormBase:WBGene00001440"
/translation="MSDLSSSLCQLNWLIAKGGLNTVQEIEVPENPNIVGSPVAPAHE
GKRRRIFDGADKPPYSYSQLIRLAIEDTPDKKCTLAEIYSFIAHNFQFYRENRNSSWK
NSIRHNLSLNKQFSRIEKTDGDRRGWWVCVDPPAKKPRILKGSPVRVNPIYEHLYHNK
QDMPNFTPPPEDPFLSEINGNVHELTEHEIRDLNLFESYDLNSSFRDVYNQIFEKSTS
PNGKKQAAQIDWLKISLEAAGLDYHDEQELQEVDTDKLKDYVYNGFPAECDSDVSTPR
TDSGRHSSSDSVLSATLQPVNNDSDDEYDWDKLL"
ORIGIN
1 atgtcagatc taagctcaag cttgtgccaa ttgaactggc tcattgccaa aggtggactg
61 aacacagtac aagaaatcga agtacctgaa aaccctaata ttgttggatc tccagtggct
121 cctgcacacg aaggaaaacg gaggagaatt tttgatggag cggataagcc accatattca
181 tactctcaac ttattcgtct agctatcgaa gatactcccg ataaaaaatg tactcttgct
241 gaaatctact ctttcattgc tcacaacttt caattctatc gtgaaaaccg gaattcaagt
301 tggaagaatt ccattcgcca taatctgtca ttaaataaac aattcagccg cattgagaag
361 actgatggag atagaagagg atggtgggtt tgtgtagatc cgccagccaa gaaaccacga
421 attctcaaag gatccccagt gcgagtaaat ccaatttacg agcatctata tcataataaa
481 caagacatgc caaatttcac tcctccgcca gaagatccat tcctgtcaga aattaatgga
541 aatgtacatg aacttacgga acacgaaata agagatttga atttgttcga gtcatatgat
601 ctaaactcat cattccgtga tgtctacaat caaatttttg agaagtccac ttcccccaat
661 gggaagaagc aagctgctca aatcgattgg ttgaaaataa gcttagaagc tgctggactt
721 gattatcacg atgaacaaga acttcaagaa gttgatacgg ataagttgaa agattacgtc
781 tacaatggat tcccagcaga atgcgacagt gatgtctcaa ctccaagaac agactctggc
841 cgtcattcat cctcagattc tgttctttca gccactcttc aaccagttaa caatgattca
901 gatgatgagt atgactggga taaattgcta taaattgtta atctaaaggt tcaaaaactc
961 acatattttt cacacagtgt ccaaatttca tttgtacaaa aatacattgt tagttagttt
1021 tc
//