Dbfetch
LOCUS XM_012208903 3462 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes valine--tRNA ligase (LOC105627588), mRNA. ACCESSION XM_012208903 VERSION XM_012208903.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130065.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3462 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..3462 /gene="LOC105627588" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:105627588" CDS 1..3462 /gene="LOC105627588" /codon_start=1 /product="valine--tRNA ligase" /protein_id="XP_012064293.1" /db_xref="GeneID:105627588" /translation="MINIKDDETTIAENGSQKTAKQLQKEAKKLAKLEKFRQKQEKKE TEKLINVKEKSEKNDKKKDTTAILYSINTPPGEKKDIICPIPDTYSPRYVEAAWYAWW EKEGFFKPEYGRKDILEENPKGNFIMIMPPPNVTGFLHLGHALTNAVEDAITRWNRMK GRTTLWNPGCDHAGIATQVVVEKKLWREEKKSRHDIGREEFIKRIWQWKYEKGDRIYS QLRKIGGSFDWSRACFTMDSKLCKAVTEAFVRLHDEGIIYRSNRLVNWSCALKSAISD IEVDKVELKGRTLFSIPGYEKKIEFGILVSFVYELLNSEDKITVATTRIETMLGDTAI AVHPKDSRYIRYIGKYVQHPFCDRHIPIIADEFVDMEFGTGAVKITPAHDPNDYEVGK RHNLPFINIFDDEGNIIGDYGKFTGMKRFEARVAIIKEMTKRNLLIDVKDNPMVIPIC SRSKDVVEPLIKPQWYVKCDEMAAQAREAVNTGALKIIPEQFKKTWYIWMDGIRDWCI SRQLWWGHRIPAYAIKFINSYENIKKIDEYWVSAHSEAEAREKAAKKLNVNMNDIIAE QDSDVLDTWFSSALFPFSIFGWPDKTPELKAFYPTTLLETGHDILFFWVARMVFMGQK LLGQLPFKEVYLHAMVRDAHGRKMSKSLGNVIDPMDVIKGISLEDLQKQLLDSNLDPK ELEQARECQKRDYPQGIPECGTDALRFALCAYTTQGRDINLDILRVQGYRFFCNKIWN ATKFALVYLEFKYNANDRKLNNNCIDVMGNDKWYQWTLNESCVQKALNNYLADYSYLD GYTPSQLDLSVYQSLKELNIDFARHLHIKRWYNHIATFTDEEKAVFRAEQNKIMPKFA YINQNQINNDDTFELTGNETNVDLWMLSRVSYAAATCDEAIKQYDFALATTTCYNLWL YDLCDIYLEYLKTIFQSEDNAAKLATQKVLFITLDVGLRLLSPFMPFITEELYQRLPR KKLIYPSICVSPYPDVVKCCWRNQEIEKDIDFAQKIIKNIRSARATYNLPNKTKTEAY ITCSNPALKEKIIRYKLLIETLAYSALSMQKPPVGCAIITVTNKIQVHLLLQGLIDSK KELEKLQKKKSQLIEIIQKLKQDLAIPDYNVKVPLDVQKNNEEKLVNNEGELQRIIDA IMILQTM" ORIGIN 1 atgattaata taaaagacga tgagaccacg attgcggaaa atggctcgca gaaaacggcg 61 aaacaattac aaaaggaagc caagaagtta gctaagttgg agaaatttag gcaaaagcaa 121 gaaaagaagg agactgaaaa attgataaac gtgaaagaaa aatcagagaa gaatgataag 181 aaaaaagata ctacagcaat tttgtatagc atcaatacac cacctggaga aaaaaaggat 241 atcatatgcc cgataccgga tacatatagt ccacgatatg tagaagccgc atggtatgct 301 tggtgggaaa aggaaggttt ttttaaacca gaatatggca gaaaagatat attagaagaa 361 aatccaaaag gaaattttat aatgataatg ccaccaccta atgtaactgg tttcttacat 421 ctcggacacg ctttgactaa tgctgtagaa gatgctatta ctagatggaa ccgtatgaaa 481 gggcgtacaa cactttggaa tccgggttgc gatcatgcgg gtatcgccac tcaagtagtc 541 gtagagaaaa agttgtggag agaagaaaag aaatctcgtc atgatattgg tagagaagaa 601 tttattaaga gaatttggca atggaagtat gaaaaaggcg atagaattta ttcacagttg 661 agaaagatag gtggttcctt cgattggagc cgtgcttgtt ttacaatgga ttctaaatta 721 tgtaaagccg taacagaagc atttgtgcgt ttgcacgatg aaggtattat ttatcgcagc 781 aatcgtttag ttaattggtc ttgtgcttta aaaagtgcaa tttcagatat tgaagtcgat 841 aaagtggaat taaaagggcg gactcttttt tctatacctg gctacgaaaa gaaaatagaa 901 tttgggattt tggtgtcttt tgtttatgag ctccttaatt cagaagataa aataactgtg 961 gccactaccc gtattgaaac catgttagga gacaccgcta ttgcggtgca tccaaaagac 1021 agtagatata ttcgatatat tggaaaatat gtacagcatc cgttttgtga cagacatata 1081 cctattatag cagacgaatt tgtcgacatg gaatttggca caggtgctgt aaagattacg 1141 ccagctcatg atccgaatga ctatgaagtt ggaaagaggc acaatttgcc attcatcaat 1201 atttttgatg atgaaggaaa tattattgga gattatggaa aattcacggg aatgaaaaga 1261 tttgaagcca gagtggctat cattaaagag atgacaaaaa gaaatctgtt aatcgatgta 1321 aaggataatc caatggtaat acctatatgt agtcgatcga aagatgtcgt tgaacctctc 1381 ataaaaccac aatggtatgt taagtgcgac gaaatggctg cacaagctag ggaagcggta 1441 aacacgggtg ctctgaaaat aattccagaa caatttaaga aaacttggta tatctggatg 1501 gacggtatta gagactggtg tatttcgcgt cagctctggt ggggccatcg aattcctgct 1561 tatgcaatta aatttatcaa ttcttatgag aacataaaaa agatagatga atattgggta 1621 agtgcgcatt ctgaggctga ggctagagag aaagcggcta agaaattaaa tgttaatatg 1681 aacgatatta ttgcggagca agattccgat gtattagaca cttggttctc ttctgctctt 1741 tttccatttt ccatttttgg ctggccagat aaaacccctg agctcaaagc attttatccg 1801 actacactgt tagaaactgg ccatgatata ctcttttttt gggttgctag gatggtcttt 1861 atgggccaaa aattattagg acagttgcct tttaaggaag tatatttgca tgcgatggtg 1921 agagatgcgc atggaagaaa aatgagtaaa tccttgggaa atgtaataga tcctatggat 1981 gtgattaaag gaatatcttt agaagatctt caaaaacaat tgttagattc gaacttggat 2041 ccaaaagaac tagaacaagc tcgagaatgt caaaagcgtg attatccgca aggtattcct 2101 gaatgtggaa cggatgctct gcgattcgcg ctttgtgctt acactaccca aggacgagat 2161 ataaatcttg atatacttcg tgtacaagga tacagatttt tctgcaataa aatatggaac 2221 gctacaaaat ttgcacttgt ttatcttgaa tttaaataca acgcaaatga taggaaattg 2281 aataataatt gtattgacgt aatgggaaat gacaagtggt accagtggac tttgaacgaa 2341 tcgtgcgtgc agaaggcgtt aaataattac ctggctgatt attcgtatct tgatggttat 2401 acaccttcgc aacttgacct atcggtttat caatcattga aagaattgaa cattgatttc 2461 gcaaggcatc tacacattaa acgttggtat aatcatatcg cgacatttac agacgaagaa 2521 aaggctgtat ttcgtgcgga acaaaataaa ataatgccga aatttgcata cattaatcag 2581 aatcaaatca ataatgatga tacatttgag ctgactggga atgagacaaa tgtagattta 2641 tggatgttat cgcgtgttag ttacgctgcc gcaacttgcg acgaagcaat taaacagtat 2701 gactttgcat tagctactac tacctgttac aatttatggt tatacgatct gtgtgatatt 2761 tatctggaat atcttaaaac aattttccaa agcgaagaca acgccgctaa gttagcaact 2821 caaaaagtat tatttataac actggacgta ggattgcgtt tattgagccc atttatgccg 2881 tttataaccg aagaattgta tcaacgttta cctcgtaaaa agttaatata tccaagtata 2941 tgtgtaagtc catatccgga tgttgttaag tgttgttgga gaaatcaaga aattgaaaag 3001 gacattgatt ttgcgcaaaa aataattaag aatattcgat ctgctcgcgc gacttataat 3061 ttacctaata aaacgaaaac cgaagcgtat atcacgtgta gtaatccagc attaaaggag 3121 aaaattattc gatataaatt actcatagaa actcttgcgt actctgctct tagtatgcaa 3181 aaaccaccag taggctgtgc tattattact gtaactaata agattcaagt acatctacta 3241 ctacagggtt tgattgactc aaaaaaagaa ttggaaaaat tacaaaagaa aaaaagccaa 3301 ttaatcgaaa ttatacaaaa attgaaacag gatttagcaa tacctgatta taatgtaaag 3361 gtgcctcttg atgttcaaaa gaataacgag gaaaaattag tcaataatga aggcgaattg 3421 cagcgaatta tcgacgcaat aatgattttg caaacaatgt ag //