Dbfetch

Dbfetch

LOCUS       XM_012208670            1686 bp    mRNA    linear   INV 02-APR-2015
DEFINITION  PREDICTED: Atta cephalotes IQ and ubiquitin-like domain-containing
            protein (LOC105627389), mRNA.
ACCESSION   XM_012208670
VERSION     XM_012208670.1
DBLINK      BioProject: PRJNA279976
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Atta cephalotes
  ORGANISM  Atta cephalotes
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
            Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_012130072.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Atta cephalotes Annotation Release
                                           100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1686
                     /organism="Atta cephalotes"
                     /mol_type="mRNA"
                     /db_xref="taxon:12957"
                     /chromosome="Unknown"
                     /sex="male"
     gene            1..1686
                     /gene="LOC105627389"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins"
                     /db_xref="GeneID:105627389"
     CDS             1..1686
                     /gene="LOC105627389"
                     /codon_start=1
                     /product="IQ and ubiquitin-like domain-containing protein"
                     /protein_id="XP_012064060.1"
                     /db_xref="GeneID:105627389"
                     /translation="MTLPIEKQKILKPYLGGWQHKITGVKYVNAASQTGPLSKRDPQK
                     NTYCKAVQCVQTNDGATQSLRHHATQMWRDDYYVPNEADKYMTVKSYESYVDMQFNLD
                     RYACVIQRNYRAYKWRKYIKECAYAYREMFEKCKKYEEEKATANKLRHKENILRQMYP
                     RSRADFDMLYDLVEKWRFDHLKDIKLRLCKADQRAENYRIVKKTIEMLNQIDKHKQAV
                     KRSSRKQNVLRFLTINCKPIRWSSYKGKLVEMTTIKIQNARKLKKIYDALNNCNVSSE
                     ERMNLLITLKKWVETHNCVEALDLLLLLDQEITLLNRKIEGLSLDYLNERITHTYLNF
                     VRMYGICGCECITTESKNNELREPLETETKLCWNCLKLLPIHKFLVHTRMKKLTICSS
                     CTSLSRRNIAHVDYDPYMFILNCVRAEEEHRDSTSALAFIMQEQDIYHLVNHIWQGQS
                     ALSKTRDLFILRMVRYQKDIEWAPWNCILLTKDEADLHYDINDLATIYSEHLISQIDL
                     RHLIAKNYFKRLMIFEKEFRESCRFSEIQSKQIKYKPPVTMENYDPSKKYKLG"
ORIGIN      
        1 atgactttgc cgattgaaaa acaaaagatt ttgaagcctt atttgggtgg gtggcaacat
       61 aaaattaccg gagtaaaata tgtaaatgcg gcttctcaaa ccggaccttt gtcaaagcga
      121 gatccacaaa agaatacata ctgcaaagcg gtacaatgtg tgcaaacgaa tgacggagca
      181 acacaatcac tgcgtcatca tgcgacacaa atgtggcgag atgactatta tgtacctaat
      241 gaagccgata aatacatgac tgtaaagtct tatgagagtt acgttgatat gcaatttaat
      301 ttagatcggt acgcatgtgt aattcaaaga aattaccggg catataaatg gaggaaatac
      361 atcaaagaat gtgcatatgc ttatcgcgaa atgtttgaga aatgtaagaa atatgaagaa
      421 gagaaagcca ctgcaaacaa attacgacat aaagagaata ttcttcgtca aatgtatccg
      481 cgatcaagag cggactttga catgctttat gatctggtcg aaaaatggag atttgatcat
      541 ctaaaggaca taaaattgcg actgtgcaag gcagatcagc gtgctgagaa ttacaggatt
      601 gtaaaaaaga cgatagaaat gctcaatcaa atcgataaac ataaacaagc ggtcaagaga
      661 tcatctcgga aacaaaatgt tctcagattt ttaacaataa attgcaagcc tatacgatgg
      721 agcagttaca agggcaaact cgtagagatg accactataa aaattcaaaa tgctcgaaaa
      781 ttaaaaaaaa tttatgatgc attgaacaat tgcaatgtta gctcagaaga acgaatgaat
      841 ttattgataa ctctgaaaaa gtgggttgaa acacacaatt gtgtcgaggc attggattta
      901 ttattattat tggatcaaga gattacattg ctaaatcgta aaattgaggg tttatcactc
      961 gattatctaa atgaaagaat aacacatact tatttgaatt ttgtaagaat gtatggtatt
     1021 tgcggttgtg aatgtattac tactgaatct aaaaataacg aattgcgaga gcctttagaa
     1081 acagaaacca aactttgttg gaattgttta aaacttcttc ccatccataa atttttagta
     1141 catactagaa tgaagaagct aacaatttgt agcagctgca cttccctaag tcgacgtaat
     1201 attgcgcatg tggattacga tccttacatg tttatattaa attgcgtgcg tgctgaagaa
     1261 gaacatcgag acagtacttc cgctttggca tttataatgc aagagcagga tatttatcac
     1321 ttagttaacc acatttggca aggtcaatcg gcactcagta agactagaga tctttttatt
     1381 ctaagaatgg tcagatatca aaaggatatc gaatgggcgc cttggaattg cattcttctg
     1441 acaaaagacg aagccgactt acattatgac attaatgatc tcgctacgat atattcggag
     1501 catttgataa gccaaattga cttgagacat ctgattgcaa agaattattt taaacgacta
     1561 atgatttttg aaaaagaatt ccgggagtct tgtcgctttt cagagattca aagtaaacag
     1621 ataaaataca aaccacctgt aaccatggaa aattacgatc catctaaaaa atacaagcta
     1681 ggataa
//