Dbfetch
LOCUS XM_012207996 3915 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes splicing factor 3B subunit 1 (LOC105626699), mRNA. ACCESSION XM_012207996 VERSION XM_012207996.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130070.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3915 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..3915 /gene="LOC105626699" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 long SRA reads, 16 Proteins" /db_xref="GeneID:105626699" CDS 4..3915 /gene="LOC105626699" /codon_start=1 /product="splicing factor 3B subunit 1" /protein_id="XP_012063386.1" /db_xref="GeneID:105626699" /translation="MDSIPRTHKDIEAQIREIQSKKKELLSAASEKEQVALGKTGFYD QDIYDSSNNKFDGYVTSIATNDEIEDYDPFADKRLPTLVDREEKDYDPFADRRRPTIA DREDEYRQKRRRMIISPERVDPFAEGGKTPDIGSRTYTEIMREQMLKGEETELRKRLA EKAKDGTLKANGEPKPAPKKRGRWDQTDDTPVQKKLSGASATPTSWDNADVTPAAIRW DETPGHGKGAETPGATPGVSTRMWDATPAHATPGAATPGRETPSHEKTVTSRRNRWDE TPKTERETPGHNSGWAETPRTDRVAGDLIQETPTPSASKRRSRWDETPSNQTPGSMTP QTPATPLATPHQATILTPSAVTPTGPKAMGLATPTPGHLMSMTPEQLQAYRWEREIDE RNRPLSDDELDALFPPGYKILQPPAGYIPIRTPARKLTATPTPIAGTPQGFFIQTEDK SAKYVDNQPKGNLPFMKPEDAQYFDKLLVDVDEETLSPEEQKERKIMKLLLKIKNGTP PMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLV RPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVR NTTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHL KSLVEIIEHGLVDEQQKVRTITALAIAALAEAATPYGIESFDSVLKPLWKGIRTHRGK GLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATD GVEAQYIKDEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRVVDDL KDENEQYRKMVMETIEKIMGNLGAADVDSRLEEQLIDGILYAFQEQTTEDVVMLNGFG TIVNTLGKRVKAYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGH LGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKV QENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIG PHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGV LKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTACAAIKHMALGVYGFGCE DALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQYTLQGLFHPARKVRD VYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYVL" ORIGIN 1 gcgatggact caattccgag aacacataaa gacatcgagg cgcagataag agagatacaa 61 tcaaagaaga aggagctgct gagtgcagca tctgagaagg agcaagttgc tttgggaaaa 121 actggtttct atgatcagga tatatatgac agtagcaaca ataaatttga tggttatgtt 181 acatcaattg caacaaatga tgaaattgag gattatgatc cgtttgcgga caaacgatta 241 cccaccttag ttgatagaga agagaaggat tatgatccgt ttgcggatag acgacgacct 301 accatagctg atagggagga tgaatatagg cagaaaagac gtagaatgat catttctccc 361 gaacgtgttg atcctttcgc tgaaggtggt aaaacccccg acattggttc cagaacatat 421 actgaaatta tgcgggagca aatgctcaaa ggtgaagaga cagagctgag aaaaagatta 481 gcagaaaaag caaaggatgg cactttgaaa gctaatggcg agcctaaacc agctcccaaa 541 aaaagaggtc gttgggatca aactgatgat actccagtgc agaaaaaatt atctggtgct 601 tcagcaacac ctacttcttg ggataatgcg gatgtaacgc cagctgccat tagatgggac 661 gaaactcctg gccacggcaa aggagcagag actcctggag ctactcctgg agtcagtaca 721 agaatgtggg atgctacacc agcacatgca acgccaggag ctgcgactcc aggcagagaa 781 acaccttctc atgaaaagac tgttacaagt cgaagaaatc gttgggatga aactccaaaa 841 actgaaagag aaacacctgg acacaacagc ggttgggcgg agactccaag aactgatcgt 901 gttgctgggg acttgataca agaaactccg acaccttcgg cgagcaaaag acgaagtcgg 961 tgggatgaaa cgccatcgaa tcaaacgcca ggctcaatga caccacaaac tccagcgaca 1021 cctcttgcaa cgccccatca ggcaacaata ctgactccaa gtgccgtcac gccgacagga 1081 cccaaggcga tgggtttggc cactccaacc ccaggacatt taatgtctat gacgcctgaa 1141 caactgcaag catatcgttg ggaacgcgag atagatgaac gaaatagacc cttatctgat 1201 gacgaattgg atgctctatt tcctcctgga tataaaattt tacagcctcc agcaggatat 1261 atacctattc gcacacccgc tagaaagctc actgcaacgc ctacgcctat cgctggtaca 1321 cctcagggtt tttttattca aacggaagat aagagcgcta aatatgtgga taatcaaccg 1381 aagggcaatt tgccatttat gaagccggaa gatgctcaat atttcgataa actgcttgtc 1441 gatgtggacg aggaaacgtt gagtcctgaa gagcaaaaag aaagaaaaat catgaaactg 1501 cttttaaaaa taaaaaatgg aactcctccg atgcgtaaag ccgctttgag acaaatcacc 1561 gataaggcaa gagaattcgg cgctggaccg ttattcaatc aaatcttgcc acttctcatg 1621 tcacctactc ttgaggatca ggaacgtcat ttactggtca aagtgattga tcgtattcta 1681 tataaattgg atgatttggt gcgaccgtat gtacataaga ttttagttgt tatcgagcct 1741 ctgctgatcg acgaagacta ctatgctcgt gtcgaaggca gagagattat ttctaatttg 1801 gcaaaagctg caggattggc tacaatgatt tccacaatga gaccagatat tgataatatc 1861 gatgaatatg tgcgcaatac gacagcaaga gcattcgcgg ttgttgcatc cgccctcgga 1921 atcccttcgc ttctgccatt tttaaaagcc gtttgccgca gcaagaagtc ctggcaagca 1981 cgacatactg gtatcaagat cgtacaacaa atagctatct tgatgggttg cgctatttta 2041 ccacatttga aaagcttagt cgaaattata gaacatggtt tagtggatga gcaacaaaag 2101 gtacgaacta ttactgcgtt agccattgct gcgctagctg aagcagcaac accatacggt 2161 atcgaaagct ttgattctgt gttaaaacca ctgtggaaag gcattcgtac acatagagga 2221 aaaggtttag cagcgtttct aaaagctatc ggttatctta ttcctttgat ggatgcagaa 2281 tacgctaatt attatactag ggaagtaatg ttaatcctta tacgtgaatt ccaatctccc 2341 gatgaagaaa tgaaaaaaat tgtattgaag gtagttaaac aatgttgtgc gacagatggt 2401 gtggaagctc aatacataaa ggatgaaatc ttgcctcact tctttaaaca tttctggaat 2461 catcgtatgg cactggatcg tagaaattat agacagcttg tggacacaac agtagaaata 2521 gctaataaag tgggtgcatc agagattatt aacagagtag tggatgattt aaaggacgaa 2581 aatgaacaat atagaaaaat ggtgatggaa acaattgaga agataatggg caacttaggc 2641 gcagcggatg tcgattcgcg tctagaggag caacttattg atggaatatt atatgctttc 2701 caggaacaaa ctactgagga cgtcgttatg ttaaatggtt ttggtactat tgtgaacaca 2761 ttgggtaaaa gagtaaaggc atatcttcct caaatatgtg gtacaatatt gtggagattg 2821 aataacaaat ctgcaaaagt cagacaacaa gctgcagatc ttatttcacg catcgcagta 2881 gttatgaaga cttgtcagga ggaaaaattg atgggacatt taggagtcgt tctgtacgaa 2941 tatttaggcg aggaataccc agaagtatta ggtagcattt tgggtgcgtt aaaagccatt 3001 gttaatgtca taggaatgac gaagatgaca ccacccatta aagatttgtt accaagactt 3061 acaccgatct taaaaaatag acatgaaaag gtacaagaaa attgtattga tcttgtgggc 3121 agaattgcag atcgaggtcc cgagtatgtt tccgctcgag aatggatgag aatatgcttc 3181 gaattgttgg aactactgaa agctcataaa aaagctatta gaagagcgac ggtaaatact 3241 tttggctaca ttgccaaagc tattggacca catgatgtct tagcaacgct tctaaacaat 3301 ttgaaagtac aggaacgtca gaatcgtgtt tgtaccacag tcgctattgc catcgttgct 3361 gaaacctgca gcccttttac agtgctacct gcattaatga atgaatatag agtacccgag 3421 ctaaacgtgc aaaacggagt attgaaatcc ttatcattct tgttcgaata tatcggtgaa 3481 atgggtaaag attatattta tgctgtcagt ccattgctag aagatgcact tatggacaga 3541 gatttagtac atagacagac cgcctgtgcc gcaattaagc acatggcatt aggtgtttac 3601 ggatttgggt gcgaagatgc attaatacat ttattgaatc acgtatggcc aaatgttttc 3661 gagacctcgc cgcatttagt ccaagcattt atggacgccg tagatggatt gcgcgttgcg 3721 cttggaccga tcaaaatttt acagtataca ttacaaggtt tgttccatcc agcccgtaaa 3781 gttcgtgacg tttattggaa aatatacaat tctctttaca tcggtggaca ggatgctctt 3841 gtggctggtt atcctcgcat catgaatgat ccaaagaacc aatatatcag atacgaattg 3901 gattacgtat tgtag //