Dbfetch
LOCUS XM_012207800 3507 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes tubby-related protein 4 (LOC105626500), mRNA. ACCESSION XM_012207800 VERSION XM_012207800.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq; includes ab initio. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130069.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..3507 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..3507 /gene="LOC105626500" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:105626500" CDS 1..3507 /gene="LOC105626500" /codon_start=1 /product="tubby-related protein 4" /protein_id="XP_012063190.1" /db_xref="GeneID:105626500" /translation="MHLHFEKNNNAKCDCNILSLSWMGKVPDESPEDEGWQLDRINYY QEGWLATGNARGLVGVTFTTSHCRTRAAELPLRANYNLRGHRSEVILVKWNEPYQKLA SCDSSGVIFVWIKYDGRWSIELINDRNTPVTHFSWSHDGRMALICYRDGFVLVGSVAG QRYWSSMLNDKATITCGIWTPDDQQVYFGTTAGQLIVMDVHGAMVSEVQLAAGVTSMA WSAEKFTMEEDETCDRSQKDDRNYVLAVCLADGNIVMLRSFDDVSPITIRSNLKPPLH AEWSNSRKLLAIAGTKESSEQSSSQEYTNLLKFYSVNGTLVYTTEIPYTQCPVSALTW GHNDRRLFVATGARVHAAWVSRRVGSLQLLSRLAVRAALTRESSVQHLPLPPRLRASV AALFANTIRCSVPEPRELRRFVSRPPPGGSRLHCTMLRHAIEPVPCYTLYLEYLGGLV PLLKGRRTSKIRPEFVIFDPQSQEALQVFDDTSQCPSYSDGSDTEKDTADLCGSPRYR KKNRKRREERMSDEAIEREEKTNDLAYVDTLPEHARLVEVTSNIWGTKFKFHGLADSV PANLGQVTYRTSLLHLQPRQMTLVMTELRDDLPSGPDPTFNPNLFSEDEEESYQEASS RVTPEAQPPPIAPMTPRNARLNHPNRPKSQISNQFLTTETLPTSLGKIENYESEYVPY VDLQDMGNLYENIRNAPTNTYRTPPRHNPPRCCDVPALQSPKNAVAPTQTLIATSNAG ADFASSIQRMKNALADQQTGIPTKKELENNKLNQISQDDKSCLTSACATNIISVSMQN GQALNTEASSSRYISQSSVLNGLESIDCASAQTVYLNGLNNMGCASNVLTASHPISGV QTMMSPSAHSFVHSKNNQNSGTSTTDANTPSNSSLLGQASGVVLNKNGIHGVVSPACS YQFPENIDQCFGSSCSQCFSKHKDPKCHVCYGKTNPGYVNVGALANVKLDEDLMRFSD DEPRDDIEGSEQSRGVHRTSTVISIGPMCSNDSIVRSCSVGYLDLVDAQLVPCDVVLR MLRRDAPNKRLVLVSRKTKRRKKAKPQHDVSQPSSKPPRLRNCGKSKSLDSSDIFPSN EQISSPPQLPEHVEEATGLVNSEVTEDDVTKRDESTELSKDEIHEIPDKRKENNRNES NIVREAYREKPCRLDATASSIK" ORIGIN 1 atgcatctgc atttcgagaa gaacaacaac gccaagtgcg actgcaatat cttgtcgctc 61 agctggatgg gaaaagtgcc ggacgagtcg ccggaggacg aaggatggca actcgatcgt 121 ataaattact accaggaagg atggttagcc accggcaacg cccgtggctt agtaggagtg 181 acttttacca cgtcgcattg tcgcaccaga gccgcggaac ttccactcag ggcgaattac 241 aatctccgag ggcatcgtag cgaagtaata cttgttaagt ggaacgaacc gtatcaaaag 301 ttggcctcgt gtgacagttc gggtgtaatt ttcgtttgga tcaaatacga cggacgatgg 361 agtatagaat taatcaacga cagaaacaca cctgttacgc acttctcctg gtcccacgac 421 ggccgtatgg ctcttatatg ttacagagat ggcttcgtat tggtcggcag cgtcgccggt 481 caaaggtatt ggtcgtcaat gctcaacgac aaagcgacga taacttgcgg catttggacc 541 ccggacgatc agcaggtcta ttttgggaca actgcgggtc agttaatcgt aatggatgtt 601 cacggggcta tggtgtcgga ggtacaatta gcggccgggg ttacgtcaat ggcctggagt 661 gccgaaaaat tcacgatgga agaggatgaa acgtgtgatc gatctcagaa agatgaccgg 721 aactacgtgc tggctgtttg tcttgccgat ggcaacattg tcatgttgcg atcgttcgat 781 gacgtgtcac caattacgat acgtagtaat ctgaagccac ccttgcacgc cgaatggagt 841 aactccagga aactgttagc tatcgccggc acgaaggaat cgtccgagca gagtagttcg 901 caggaataca cgaatctcct aaagttttat tcagtcaacg gtactctcgt gtacacgaca 961 gagattccgt acacgcaatg tcctgtatcg gcattgacat ggggacacaa tgacaggcgg 1021 ctcttcgtag cgactggagc gcgcgttcat gccgcatggg tctccagaag agttggttca 1081 cttcaactgt tgtcgagact agcggtgaga gcggctctca cgagggaatc aagtgttcaa 1141 catcttccgt taccaccgcg attgagagcc tcggtggccg ctcttttcgc taataccata 1201 cgatgttcgg taccggaacc aagagagctg cgacgcttcg tgtcaaggcc gccgccggga 1261 ggcagccgat tacattgcac tatgctcagg catgccatag agcctgtgcc atgttacacc 1321 ctgtatttag agtacttagg tggtctggta ccgcttttga agggcagacg gaccagcaag 1381 atccggcccg agtttgtgat attcgatccg caaagtcaag aggctttgca agtattcgac 1441 gatacgtcac agtgcccgtc atacagcgac ggctcggaca cagaaaagga caccgcggat 1501 ttgtgcggat cgcctcgcta cagaaagaag aatagaaaaa gaagagaaga gaggatgagt 1561 gacgaagcaa tagaacgaga ggaaaagaca aacgatcttg catatgtgga tacattgcca 1621 gagcacgcaa ggttggttga ggtaacgtcg aacatctggg gcacgaaatt caagtttcac 1681 ggcttggcag attcggttcc cgcaaaccta ggtcaggtaa catatcgaac gtcgttgcta 1741 cacctacaac ccaggcaaat gacgctcgtg atgacggagc tccgggacga tttgccctct 1801 ggtccagatc caacgttcaa ccccaatctg ttctccgagg acgaggagga gtcgtaccag 1861 gaggcaagtt cgcgagttac tccagaggcg caaccgccgc cgatcgcacc gatgactcct 1921 cgtaatgctc gactgaacca tccgaatcga ccgaagtctc aaatctcaaa tcaattcttg 1981 acaacggaga ctttgccgac gtcgctagga aaaatcgaaa attacgagag cgagtatgtt 2041 ccatacgtcg atctgcagga catgggcaat ctttacgaaa atatcagaaa tgctcctacg 2101 aacacttatc ggacaccgcc tcggcacaat ccgccgagat gttgcgacgt accggcctta 2161 caatcgccga aaaatgcggt cgcgcccaca caaaccttaa tagcgacttc gaacgcgggt 2221 gctgatttcg ccagcagcat tcaaagaatg aagaacgctc tcgcagatca gcaaacgggc 2281 ataccgacga agaaggaact ggagaacaat aagctcaatc aaatctcgca ggatgacaaa 2341 tcgtgcctga catcggcctg tgcgactaat atcatttctg tgtctatgca aaatggtcaa 2401 gccttgaata cggaagcgtc gagcagtcga tatatctctc aaagttcggt tttgaacggt 2461 ttggagagta tcgattgcgc ttcggcgcaa accgtatatc tgaatggtct aaataatatg 2521 gggtgcgcga gcaacgtttt gaccgcttca catcctatca gcggtgtcca aacaatgatg 2581 tcgccgagcg ctcatagttt tgtacatagt aaaaataatc aaaattccgg gacaagtacg 2641 acggacgcta atacgccttc aaatagctct ctactcgggc aagcttcggg tgtagttctt 2701 aataagaacg gtatacacgg agttgtttcg ccggcatgtt cctatcagtt cccggagaat 2761 attgatcagt gctttgggtc atcgtgttcg cagtgtttct caaagcacaa agaccctaag 2821 tgccacgtgt gctacggaaa gacaaatccc ggctacgtga atgtcggagc tctcgctaat 2881 gttaaacttg acgaggattt aatgcgattt agcgacgatg aaccacgcga cgatattgag 2941 gggtcagaac agtcgcgagg cgttcataga acttcaacag tcatcagtat cggtccgatg 3001 tgctcaaatg actcgatagt tcgaagctgt agcgtcggat acttggatct tgtggatgcc 3061 caattagtcc catgtgacgt agtcttgcga atgctgcgta gagacgcgcc gaacaagagg 3121 ctagtgttgg tgtcgcggaa aacaaaacgg cggaaaaagg ccaaacctca acatgacgtg 3181 agtcagccga gctcgaaacc gcccagactc cgcaactgtg gcaagtccaa gagtctcgat 3241 tccagcgata tatttccgag taacgaacag atatcctctc cgccgcaatt accagaacat 3301 gtagaggagg caacggggtt agtcaattcc gaagttaccg aagatgatgt gacaaagcgc 3361 gacgaatcga cagaattatc gaaagatgag attcatgaga ttcccgataa acgcaaggaa 3421 aataatcgca acgaaagtaa cattgttcgc gaagcttata gggaaaagcc atgtcgatta 3481 gatgctactg catcttccat caagtaa //