Dbfetch
LOCUS XM_012205166 5571 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes proteasome activator complex subunit 4B-like (LOC105623789), mRNA. ACCESSION XM_012205166 VERSION XM_012205166.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130128.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5571 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..5571 /gene="LOC105623789" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:105623789" CDS 1..5571 /gene="LOC105623789" /codon_start=1 /product="proteasome activator complex subunit 4B-like" /protein_id="XP_012060556.1" /db_xref="GeneID:105623789" /translation="MMNECDRDAENDSTMLSLSFKTDFAEFRPQKELVYNKLLPYANE LDVESRIWLAEIKGNLGRAVMLRELTPGCVFWSNRLNLYIELYGMKFSKKDHIAFIKL MYELVTIPNLDSNLINKFSTTLVLLLKKKKLISPDELELPWRPLYKIMTHCLQRNTIG IHRNLLWLKTLLHCVIYSVKIYFPLSATQEILDELRPKLCPHDGLTMCTSLQILECFL PLQLSPEHHSIGYQLWFDEFMTMWKVCHNGPQWENNMMCLIARLAAFNIGYIDWEPYI PFMFTRFIRCLNLPVTYKQTPNNLNHKIEMSSITMWIVATLGNGSSTQTYLEKFLKTI ETYFYPANFGRWMVKLKELLVKLPYHFIIRLHVERYTKPTWETPIPDNYKLTDSDVDA FVKSILPVAMTAMFNKFCINDACQALQHLATMRPNLVIPDMLERMHSTFDSLTEPHKL TASMICMVAVARPMVQGSRNINKGYAYSEGPMHVLPLLFSLLPGIDPNDVGKTFATFR LISVYATLIPIVDSSRSTAIMTEEERIVCEATSRFEDFVLQFLDRVFMFIDSSSSENV RLENRGGNSKSKLESIAEVALSGVCATLLREMSDVIFESALHKLRTFMTERILETKVA GQLAAAVYNSFSHINGCDTLRALLPALAQTILPLVSEEEDILKEENLDHRLLHAMLIL SAIVDTPGNNLIPHMDTLFKVLDRVLLLRSMDGNKLACHLLKSILSSLSMITPWQYRS NKRDYNDSNYPYVREWGQSVDLDNFCINWYIPGEEEIAAIQRIFSRYLMVQIDKLNRY CKDTSILSREELFASLNIVCSIIRGSESVLPLWTETPLELVKSSVKWNVSIIPTCGIK RYITMPDGSNVRHYLVEVMNQIQRVMLENAEDNTKSFFGLIRIWTSLLLGKIRLRERD GRRKGFLAIKKTFEDRLVGNKSHIASVIMDRCDIQHEIRSIAQSVALTETHKRIIFEL FTLAVGRYADVRSKAQASLFSAFKTFPYSYTLIMPRFIDILRKDTEEHHDAYKGVLYI LLGPQHAPIITQGDLDILTSLWPAIVLSKPSEKLSVIRLKQNIVDTISKYFCLNTLEL EISDMCLTAAQALWKHFPQPVLLQPDQNEIEESAWNLKQLNQSNLKAYSDLLDELLRC ILEESLHWRHRLMAMTFIRDLVHPNQVYSAKLVRYFLQALIHDSLQERKIATRVVTFM LKQQKRKHLKITIDVHNLSNESIKEKKSQNIMPGIRADNSWLQYNYETRPLTAKQWDE SRYVHQPYIGYYVWPKILEVYAPSSQQPCLDPEMRELTDCEREIYSFFDDPQNIEKLV NYFSLEEKKGKDKFSTLRCVLFKGVFRNHGIVHLKRFLPHLERLVMDKHESSQRCAAE IAAGIVRGAKHWPFQMTFDLWQALLPIIRIAIANLTEETVIDWGVCFATMQQHRDPNR HHWLLECLMEDPPLKDSFVECGRLYVLQSALNQQSWRVMELLQRLLVRLENRLLTNPF QNVRERLGSVLVTIFNADLRFPHNTTDIVIPRMQTLIDKIVPKLEQLKKDDDIDTLSN LDKDETLLEKVANVSVDESKETSKSRVEEQETPIRLLKTVCKWITISLAPSQYIMSPG FYQIFPIICQLENSEADEELNKSCLRTLATLAQAFTLPEDMSIALTAVKKVSEHSSWS ARFTSLEFLQVLVFHNMGIILSNALWTNCVKDTVLHLLEDDRLEVREKASRVLGGLLH CTFITDHEKLLEEFKRKARTRLQKKNNSINPALGNKNDAIRIRHGGVLGLCAFIHAHP YDVPKYVPSVFEHLGLHMNDPQPIPMTIRKTLSDFKRTHYDGWTGMRGHAQCFTEEQL AVLQDLTVPPSYYA" ORIGIN 1 atgatgaacg agtgcgatcg tgatgcggag aacgattcaa cgatgctgtc tttgtcattc 61 aagacggatt ttgcggaatt tcgtccgcaa aaggagctag tgtacaataa attgttgccc 121 tatgcgaatg agcttgatgt agagtcacgt atatggctcg ctgagatcaa aggaaatttg 181 ggacgcgcgg tcatgttacg tgagctaaca ccaggatgcg ttttttggtc gaacagattg 241 aatttatata tagaactata tggaatgaag tttagtaaaa aagatcacat agcatttata 301 aaattaatgt atgagcttgt taccataccg aatttggatt caaaccttat taataaattt 361 tctactactt tggttttatt attaaagaaa aagaaattaa ttagtccaga tgaattagaa 421 cttccatgga gacctttata taagattatg acacattgtt tacagcgcaa tacaattgga 481 atacatcgta accttttgtg gttaaaaact ttattacatt gcgtgatcta ttccgtaaaa 541 atttattttc ccttgagcgc tacgcaagaa atattagatg aattgagacc gaagctttgt 601 cctcatgatg gattaacaat gtgcacaagt cttcagattt tagagtgttt tttgccgtta 661 caattatctc ctgagcatca ttccattgga tatcagttgt ggtttgatga gtttatgacc 721 atgtggaagg tatgccacaa tggtcctcaa tgggaaaaca atatgatgtg tttaattgca 781 agattggcag cttttaatat tgggtatatt gattgggaac catatattcc cttcatgttt 841 actagattta tacgatgctt aaatttgcca gtaacatata agcagacgcc aaacaactta 901 aatcacaaaa ttgaaatgtc gtcaataact atgtggatag tagcgacttt gggaaatggc 961 tcaagtacac agacatattt ggaaaagttc ttgaaaacta tagaaacata tttttatcca 1021 gcaaattttg ggcgatggat ggtaaagtta aaggaactcc ttgtcaaact tccatatcat 1081 tttatcatac gtttacacgt agagagatat actaaaccaa catgggaaac tccaattcct 1141 gacaattaca aattaactga ttctgacgtt gatgctttcg ttaaaagtat attgccagta 1201 gctatgacag ctatgtttaa taaattttgt ataaatgatg catgtcaagc tctacagcat 1261 ctagctacta tgagaccgaa tttagtaata ccggacatgt tggaaagaat gcactctaca 1321 tttgattcct tgactgagcc acataaactt acagcttcaa tgatttgtat ggtagctgtt 1381 gccagaccaa tggtgcaagg ttctaggaat ataaacaaag gttatgctta ttcagaagga 1441 ccgatgcacg tgttgccgct actattttcg ttgttaccgg gaattgatcc aaatgacgtt 1501 ggaaaaactt ttgctacatt tcgtcttatt tccgtttatg ccacgttaat ccccattgtg 1561 gactcttcta gatcgaccgc gatcatgaca gaggaagaaa gaatagtctg cgaagcaaca 1621 tcgcgttttg aagatttcgt attgcagttc ctggacagag tgttcatgtt catagattct 1681 agctcgtcag agaatgtgcg actcgagaat cgcggtggta actcgaagag caaattggag 1741 tcgatagcgg aagtagcact ttccggcgta tgcgcgaccc ttctgagaga aatgagtgat 1801 gtaatcttcg aaagtgccct gcacaagttg cgtacattta tgactgagcg aattctcgag 1861 actaaagtcg cgggccaact ggcggcagct gtgtacaatt ctttttctca cattaacgga 1921 tgcgatactt tgcgcgcgct attgcctgca ctcgcacaaa cgattttgcc gttagtaagc 1981 gaggaagagg acatcttgaa ggaggaaaac ctagatcacc gtctattaca tgctatgctc 2041 atactgtctg ctatcgttga cacacctggc aataatttga taccacatat ggatacatta 2101 ttcaaagttc tcgatcgcgt tcttcttttg agatcgatgg atggcaataa attggcttgt 2161 catttgttga agtctattct atcatcatta tcgatgataa ctccatggca gtatagatca 2221 aataagagag actataatga ttccaattat ccttatgtta gagaatgggg tcaaagtgtg 2281 gatcttgata atttctgcat taattggtat attcctggcg aagaagaaat cgctgctata 2341 caacgaatat tctcaagata tttaatggtt caaattgaca aacttaatag atactgcaaa 2401 gatactagta tattaagtag ggaagaatta tttgccagtt tgaacatcgt atgtagtatt 2461 attagaggtt ccgaatctgt cctaccatta tggacagaaa caccactcga attggtcaaa 2521 tcttccgtaa aatggaatgt atctataata cccacatgtg gaataaagag atatattaca 2581 atgcctgatg gaagcaatgt tagacattat cttgtcgagg tcatgaacca aatccaacgg 2641 gtaatgctcg aaaacgcaga agacaatacg aagagtttct tcggattaat acggatttgg 2701 actagtctat tgctgggaaa gatacgatta cgcgaacgtg atggacgacg caagggtttc 2761 ttagccatca aaaagacatt tgaagataga ttggtaggaa ataagagtca catagcttca 2821 gtgataatgg atcgctgtga cattcagcac gaaatcagat cgatcgcgca atcagtcgca 2881 cttacagaaa ctcataaacg aataatattt gaattgttca ctttggccgt aggcagatac 2941 gcggacgtac ggtcaaaagc tcaagccagt ctcttctctg cttttaaaac tttcccatat 3001 tcttacacgc ttataatgcc gcgttttata gatattttga ggaaagatac cgaagaacat 3061 catgatgcat ataagggtgt tctgtatata ttgctcggac cgcaacatgc tcctattatt 3121 actcagggag atttggatat attgacatca ttatggccag ccattgtgct ttctaagccg 3181 tccgaaaaac tttctgtaat tcgtttgaaa cagaacattg tagatactat aagtaaatat 3241 ttctgtttaa atacgctcga gctcgaaata tccgatatgt gtttgacggc tgcacaagcg 3301 ttgtggaaac acttcccgca accagttttg ctacagcctg atcaaaacga aatagaagag 3361 agtgcgtgga atttaaagca acttaatcaa tctaatctga aggcatatag tgatctgctc 3421 gatgaacttt tacgttgtat actcgaggaa tctttacatt ggcggcacag attaatggcg 3481 atgactttca tacgagactt ggtgcaccca aatcaagttt attccgcaaa attagtacgt 3541 tattttttgc aagcgcttat acacgattcc ttgcaagaaa gaaaaattgc caccagagta 3601 gtgacattta tgttgaaaca acaaaaacga aaacatttga agataacgat tgatgtgcac 3661 aacttatcca atgaaagtat aaaggaaaaa aaatcgcaaa atattatgcc cggtataaga 3721 gctgataatt cttggcttca gtacaattat gaaactcgtc cattaaccgc taaacaatgg 3781 gacgagtcca gatacgttca tcaaccatac ataggttatt acgtttggcc aaaaatttta 3841 gaagtatacg caccttcgtc tcaacaaccc tgccttgatc cagaaatgcg tgagctgacg 3901 gattgtgaga gggagatcta ttcctttttt gatgatccgc aaaacattga gaagcttgta 3961 aattatttca gtttggagga gaagaaaggc aaggacaaat tcagcacatt gaggtgtgtt 4021 ctgtttaagg gcgtatttcg caatcatggg atcgttcatt tgaaacgttt cctgccacat 4081 ttggaacgac tggtaatgga caagcatgaa agcagccagc gatgtgctgc ggagattgca 4141 gctggaatag tcagaggcgc caaacattgg ccgttccaaa tgacatttga cttgtggcaa 4201 gcattattgc ccatcataag aatcgcgatc gcgaatctaa cggaagaaac cgttatagat 4261 tggggtgtat gcttcgcgac aatgcaacaa catagagatc ctaataggca ccattggcta 4321 cttgaatgtc tgatggagga tccaccgtta aaagattcat tcgtggagtg cggtcgtctg 4381 tatgtattgc aatccgcttt gaatcaacaa tcgtggcggg taatggaact actgcaacgt 4441 ttgctggtgc gcttggagaa ccgattgctg acgaatccgt ttcagaatgt ccgagaacgt 4501 ctgggatcag tattggttac tatattcaat gctgatttga gattcccgca caatacaact 4561 gatattgtga ttccgcgaat gcagactcta atcgacaaaa ttgtgccgaa attagaacaa 4621 cttaaaaagg atgatgatat agacacacta agcaatcttg acaaagatga aactttatta 4681 gaaaaggtgg ctaacgtttc agtcgatgaa tcaaaagaaa cgtcgaaatc cagagtggaa 4741 gaacaggaga ctcctataag attgttgaaa actgtttgca aatggattac gattagcctg 4801 gctccttcac agtatatcat gtcaccagga ttttaccaaa tatttccgat catatgtcaa 4861 ttagaaaact cggaagcaga tgaagagctt aataaatcat gtttacgtac cttagcaacg 4921 cttgcacagg cattcacatt gccggaagat atgtcaatag cattgacagc agtgaaaaaa 4981 gtatccgagc actcatcgtg gtctgccaga ttcactagct tggaatttct tcaagtattg 5041 gtttttcaca acatgggcat aattcttagt aacgcgttgt ggactaattg cgttaaagat 5101 accgttttgc atttgttaga agatgatcgt ttagaggtca gagagaaggc tagtcgagta 5161 ctcggtggat tattgcattg cacatttatc acagatcacg aaaaattact ggaggagttt 5221 aagagaaaag caaggactcg attgcaaaag aaaaataatt ctattaatcc agcgttggga 5281 aacaaaaatg atgcgatacg tatacgtcat ggtggtgttc ttggactgtg tgcttttatt 5341 catgctcatc catacgatgt gcccaaatat gtgccttcag tcttcgaaca tctcggtctt 5401 cacatgaatg atccacagcc tataccgatg acaataagga aaactttaag tgatttcaaa 5461 cggacgcatt acgatggttg gacaggaatg agaggtcatg cacaatgttt tacggaagag 5521 caattagccg tcttacaaga tttaacagtg ccgccatcat attatgctta a //