Dbfetch
LOCUS XM_012204628 8259 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes neurofibromin (LOC105623227), mRNA. ACCESSION XM_012204628 VERSION XM_012204628.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq; includes ab initio. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130118.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 3% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..8259 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..8259 /gene="LOC105623227" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins" /db_xref="GeneID:105623227" CDS 1..8259 /gene="LOC105623227" /codon_start=1 /product="neurofibromin" /protein_id="XP_012060018.1" /db_xref="GeneID:105623227" /translation="MGTQKPGEWANLVITRFEDQLPCRSGPESPHSRVNEKRSKRCLI EISRFRFSLVISGLTKMLQRVNELTPSTSSQRPFQSKEQDRQESIIIVLDTLEKCLAN TPKDTTKFEEAMNVKLLLREICQFIGMPYDSPQTKMIRDLASKVLFALSLNFFNAVFN RISARLQELPNSGDENSDYSDIELMQYINFDVHRLTRLLNEIIQKVRQLTGKKSAYLV IMNPLEKAIWNWMDTYSQEFTDVQRQPNGDISKACEELFDILDTFVAEKKSRAASVWP LQVMLLILSPKVLEIVNADTGSPDSPRYSKKKQFVDNVKRNLRMHGSSSSRQLSEAAA VTCVNLIKAATYVSNDSVTNVVLILAKQLMDDLMNLLFNPSKQFSRGQNYSAQDIDLM IDCYVSSFRIDPVNNEAFFKFCLNVNYPSTYQFVLVSSLYKIFTQPRLSWWPETSLVY SYGTDLRNMFTDTLNKMTQNCSNTPLRMIHNFSLKSKEEMANSKNLLLVLVRLIHVEP MLMLHNYGTAGHEIQKSTLELINGLVSLVHQPTMPDIAHEAMEALLELHHPDKIKAWN PEAPLDTFWDASSQVVFSISQKLIQHQIFNYTTILKWLHKILSCRNAFLSQYKDYANV ESHVVISKQAHVKLEVMCLIYLWSIDIEAVLVSMSCFALLCEEAEILCGSDGVAVTCL LPNYQLYLELAQASTVLISAHGDTRLYYQEYNYGRATLQKKILSLLRKIEHCVAWEET FRNWEATSRQLSNYPKSKTEDVQVEPFCRGNVKRRAAHQNSEHEMEDQINEWANMTGF LCALGGVCLQRRSPNKPPCGVFPFNSEHKKSLIKQQDSISSSNSNQEAQCCPVTQFVF NLLRLLICNNEKLGNQIQKHVKELVAHEMSPALYPILFDQIKNFVEKFFDPHGHVVIS DLNTQFIEHTIFIMKNILDSTTDQPSEYLGVTSIEGMMLAIVRYVRHLDKTVHSILIK TKLCQLVEAMMKRRDDLAFRQELKFRNKLVEYLTEWVMCTHPHSSTTANDILTYATDL DQASMEAVGALLRELPLQPEDSDRVDLMEAKSELFSKYFTLFMKLMNYCNGPSSTAED KDVVPRPTLTTNKVAILRNTAIQAMSNLLSANIDSGLRHSIHLGYNTDLQTRAAFMEV LTKILQQGTEFDTLAETVLADRYEQLVQLVTMISDKGELPIAMALANVVTTNQMDELA RVFVTLFDAKHLLSPLLWNMLYREVELTDCIQTLFRGNTLGSKIMSFCFKIYGTSYLQ GLLEPLITPLLDNSTIHFEVDSARIDSSENIEQNGENLIMLTQKVFNAIVSSADTFPP QLRSMCHCLYQVLCKRFPQSPQSNIVAVGTVIFLRFINPAIVSPQESGIINKPVPHEI KRGLMLMSKILQNIANHVEFSKEQHMLPFNNFLRTHFEIGRRFIIQIASDCETIDQTS HPMSFVSDANVLALHRLLWNHQEKIGDYLSSSRDHKAVGRRPFDKMATLLAYLGPPEH KPVDSHSLFSTTYVRMSRWANKDMSSTNFEEIMMKYNMHEREEFKSIQSMNIFYQAGT SKQGHPVFYYISRRFKLGETNGDLLIYHVILTLKPFYHSPYDVVVDLTHTCSDNRFRT EFLQKWFYVLPAAAYENLHAVYIYNCNNWVREYTKYHDSILAPLKGNRKIVFIDGQGK LNDVIDVEQQKLPGATLSLDEDLKVFTGVLKLSHKEMKVSVKIGPTTLQITHTDRSKV LSQSILLNDVYYASEIEEVCLVDDNSFVLSISNEAGPLTFAHSDCNSIVQNIAHIRSR WTLSNPNSLSVHSKIRPKDVPGTLLNMALLNLGSPDPNLRTAAYNHLCALTATFGLKI EGQLLETSGICIPSNNTIFIKHLSETLAANDPHLTLEFLKECIQGFRESTIELKHLCL EYMTPWLSNLVRFYKPHDESKRQKQVTEILDDLITLTVQEIEMYPSIQAKIWSTIGML PELIDGVLDIFLQRSTRYGLGSPMAEIMADTAVALASGNVELVAKKVINKVCRIVDKT CMSPTTQLEQHIMWSDIAILARYLLMLSFNNCLDVGKHLPHLFHTVTLLLCSGSLTMR ASTHGLVINIIHSLCTCSSPAFSEDTHRILRMSLDEFSLPKFYLLFGISKVKSAAGTA FYKHPNSSNKPVNEKWLSSDQRSSHGTQDKERLYLPNLEVITDALLEIIEACMRDIPK CDWLKTWTSLAKNFAFCLNPALQPRALIVFGCISKSITDQDMKQLLKILMKALESFND INLIEAIVMCLTRLQPLLRPESPIHRYLFWIATSVLELDETSLYASGLALLEQNLHTL DSQGTFDEKTLEHVMMSTREPLESQFKLLDYTVGLSFKSNFHFALVGHLLKGYRHPTP TTVTRTVRVLTMLLAIIAKPSKRDKFEVTPESVPYLTALVAVSEEVRSRCHIRHSLDK SLHDSSGSSDVLDTLPSRNTEMPGASNPRRQKTWDLLDQSALTQAKQQKQSAQTGRLL FKSQRSLSVPSAKDDKSTDNTEQQRDRSTRVSLSNENNVLLDPEVLTDFSTQTLVLTM LATLVKYSTSENETRILYEYLAEATIVFPKVFPVVYNLLDAKIISVLSSCQDQVILSA VQTIIQNMIACEDSNQHHLQHYLQTCGFRGLWRFAGLYTNSNCTHENAELFVNCLKAM VEILETYLIQESNSKEEVIIRKSKRANNCQTDNTESKTKSKTESKTKSSPVQEQIRVQ EQSEIDVHTDRNTDNKRDDSVDIRRAEDTGGDDGGGHSHS" ORIGIN 1 atggggacgc aaaagcccgg ggaatgggcg aatttagtga tcacgcgttt cgaggatcag 61 ctgccatgtc gttccggtcc cgaaagtcct cattctcggg tgaacgaaaa gaggagcaag 121 agatgtctaa tagagatctc tcggttccgt ttctctctcg ttatatctgg tcttacgaag 181 atgctgcagc gagtcaatga gcttacacca agcacaagca gtcagcggcc attccaatcc 241 aaagagcaag atcggcagga gtccatcatt atcgttctgg acacgctgga aaagtgtttg 301 gcaaatacac caaaggacac aacgaaattc gaagaggcga tgaatgtaaa attgttgctt 361 cgggagatat gccagttcat aggcatgccc tacgacagtc cacagacgaa aatgatcagg 421 gatttagcga gcaaagtact gttcgcttta agtttgaatt tcttcaacgc tgtctttaac 481 cggatatctg ccaggcttca ggaattgccc aatagcgggg atgagaattc agattatagt 541 gacattgagt tgatgcagta tatcaatttc gatgtccata gattaaccag actactgaat 601 gaaattatac agaaagtccg gcaactaact ggcaagaagt cagcgtatct cgtgattatg 661 aatcctttgg agaaagctat ctggaattgg atggatacgt attcgcagga gtttaccgat 721 gtgcaaaggc agcctaacgg ggatattagt aaggcgtgtg aggagttatt cgatattctc 781 gacacgtttg tcgccgagaa gaaaagtcgc gcagcctctg tttggccgtt gcaggtgatg 841 ttgttaatac tctcgcccaa ggtgttggag atcgtgaacg ccgacactgg atcacccgat 901 tctccacggt attcgaagaa gaagcaattc gtcgacaatg tgaagcgtaa tctaagaatg 961 cacggtagct cttctagtcg ccagttgtct gaggctgctg ctgtcacatg cgtcaatctc 1021 atcaaagcag cgacatatgt tagcaacgat tctgtcacca acgtcgtcct aattctggcg 1081 aagcaactga tggacgattt aatgaacctt cttttcaatc cttcgaaaca attttcacgc 1141 ggacagaatt atagcgcgca ggacatcgat ttgatgatcg attgctacgt cagctctttt 1201 cgtatcgatc cagtcaacaa cgaagctttc tttaagtttt gtttgaatgt caactacccg 1261 tcaacgtacc aattcgtcct agtcagctca ttgtacaaaa tctttacaca gccgagatta 1321 tcgtggtggc cagagaccag tcttgtatat tcatatggca cagacctcag aaatatgttt 1381 actgataccc tgaacaaaat gacgcagaac tgtagtaata cgccattgcg catgattcat 1441 aatttttctc tcaaatctaa agaggagatg gctaattcta aaaacttgtt gttggtgttg 1501 gtgcgactca ttcacgtgga acctatgtta atgttgcata attacggcac agctggtcat 1561 gaaatacaaa agtccacttt agagctgatt aatggacttg tctcattagt ccatcagccc 1621 acaatgccag atattgccca tgaagcgatg gaggctttgt tagagctaca ccatccagat 1681 aagatcaaag catggaatcc agaagcgccg cttgatactt tctgggacgc cagttcgcaa 1741 gttgtcttct caatctctca gaaattgatt caacatcaaa ttttcaatta cacaactata 1801 ctcaaatggc ttcacaagat actgagttgc agaaatgctt tcctttctca atacaaagat 1861 tacgcgaatg tggagagcca cgttgtgatt agcaaacaag cacatgttaa acttgaggtc 1921 atgtgtttga tatatttatg gagcatagac atagaggctg ttttggtatc catgtcctgt 1981 tttgcattat tatgcgaaga agctgaaatt ctttgtggca gcgatggagt agcagtgacc 2041 tgtttgcttc ccaattatca gctgtattta gaattggcgc aagcttcgac cgtattgatc 2101 tctgcccacg gggacactag actatattat caggaatata attacgggcg tgccacatta 2161 caaaagaaaa tattatcttt attgagaaag atagaacatt gcgtagcttg ggaagaaaca 2221 tttagaaatt gggaagcgac ttcacggcaa ttgtccaatt atcctaaaag caaaactgaa 2281 gatgtacagg tagagccgtt ttgtcgcggc aatgtaaaac ggagagcggc gcaccaaaat 2341 tcagaacacg aaatggaaga ccaaattaat gagtgggcta acatgacagg gtttctttgc 2401 gctttgggtg gagtatgtct acaacgtcgt tcacctaata aaccaccatg tggtgtattc 2461 ccttttaatt cggagcataa aaagagtttg ataaaacaac aggattctat ctcttcatca 2521 aattctaatc aagaagcaca atgttgtcca gtgacacaat tcgtatttaa cttattacga 2581 ttattaattt gcaacaatga gaaacttggt aatcaaatac agaaacacgt aaaggagttg 2641 gtcgcacacg agatgagtcc tgctctatat ccaatattat ttgatcagat aaaaaatttt 2701 gttgagaaat tcttcgaccc acatggtcat gtagtgattt cggatttaaa cacacaattt 2761 attgagcaca ctatatttat aatgaaaaat attttggatt caacgacgga tcaaccatcg 2821 gaatatcttg gagtgactag catcgaaggc atgatgttgg caatcgttag atacgtcagg 2881 cacttggaca agacggtgca ctcgatttta attaaaacca aattatgcca gctagttgaa 2941 gctatgatga agagacggga cgatcttgcg tttagacagg agttgaaatt tcgtaataaa 3001 ctagttgaat atttaactga gtgggtaatg tgtacacatc ctcattcttc aacaactgcc 3061 aacgatatcc taacttatgc cacagatttg gatcaagcta gcatggaagc agtaggagca 3121 ttgttacgtg aattgcctct acaacctgaa gattctgatc gtgttgattt gatggaagca 3181 aaatctgaac ttttttcgaa atattttacg ctgtttatga aattaatgaa ctactgtaac 3241 ggtccatcat caacagcaga agacaaagat gttgtgcctc ggcctacttt aacgactaac 3301 aaagtagcca ttttgcgcaa tactgctatt caagctatga gtaatcttct tagtgctaat 3361 atagacagtg gcttgaggca ctccatacat ttgggctaca atacagatct gcagacacga 3421 gccgcattta tggaagtgtt gactaaaatt cttcagcagg gcacggaatt tgatactctt 3481 gccgaaactg tgctagcgga cagatacgaa cagttagttc aacttgttac aatgatcagt 3541 gataaaggcg aattgcctat cgccatggca ctggctaatg tagtgacgac gaatcaaatg 3601 gatgaattgg cgcgtgtctt cgtgacactg tttgacgcaa aacatttgtt atcaccatta 3661 ttatggaata tgctctaccg agaagtcgag ctaactgatt gtatacagac tctttttcgc 3721 ggtaatactc tgggaagtaa aatcatgtcc ttctgcttta aaatttatgg caccagctac 3781 ttgcaaggct tactcgagcc tctcattaca cctttactgg ataactcaac aattcatttt 3841 gaagtagata gtgcaaggat tgattctagc gaaaatattg aacaaaacgg tgaaaactta 3901 atcatgttga cacaaaaagt gttcaatgct atcgtatcat cggcagatac gtttcctccg 3961 cagttacgct ctatgtgtca ttgcctgtat caagtattat gcaagagatt tccacaatct 4021 ccgcaaagta acattgtagc cgtaggaacg gtgatatttc tgcgtttcat taatcctgca 4081 atcgtctcac cccaagagtc tggtatcata aataaaccag taccacatga aattaagcga 4141 ggcctaatgc ttatgtcaaa gatattgcag aatattgcaa atcatgtaga atttagcaag 4201 gagcagcata tgttgccttt taataatttc ttaagaacgc attttgagat tggtcgacga 4261 tttatcatac agatagcttc ggattgtgaa acaattgatc aaaccagtca tcctatgtca 4321 ttcgtttcgg atgccaatgt attggcgttg cacaggttgt tgtggaatca tcaagaaaaa 4381 attggagatt atcttagtag tagtagagat cataaagctg tcggaaggag accatttgac 4441 aaaatggcta cgttattagc gtatcttggg ccacccgagc ataaaccggt ggattcccat 4501 tcgctttttt ctactactta cgttcgcatg tcacgatggg cgaataaaga catgtcgtcc 4561 actaattttg aagaaatcat gatgaaatat aatatgcacg agagagaaga atttaaaagt 4621 atccaaagca tgaatatttt ttatcaagca ggcaccagca aacaaggcca tccagtattt 4681 tactacattt cacgacgatt caaacttggc gaaacgaatg gcgatctact gatatatcac 4741 gtcattctaa ctttaaaacc tttttatcat tctccatatg atgtagttgt cgatcttact 4801 cacacgtgtt cagataatcg gtttaggaca gaatttttgc aaaaatggtt ttacgttcta 4861 cctgcggcag cttatgaaaa tcttcacgcg gtgtacattt ataattgtaa taactgggta 4921 cgtgaataca caaagtatca tgatagtatc ttggcaccat tgaaaggtaa tcgaaaaatt 4981 gttttcatcg atggccaagg aaaattaaac gacgtgatcg atgtcgaaca acaaaaatta 5041 cctggagcaa cattatctct ggatgaagac ttgaaagtct tcactggcgt cttgaaacta 5101 tctcataaag aaatgaaggt gtccgtgaag atcggaccaa cgacactaca gataacgcat 5161 acagatagat ctaaagtgtt atcgcaatcc attctcttaa atgatgtcta ttacgcgtcc 5221 gaaatagaag aagtttgctt agtggatgac aattcatttg tgctaagcat ttccaacgaa 5281 gcaggacctt tgactttcgc tcacagtgat tgcaacagca tcgttcagaa tatagctcac 5341 attagaagtc gctggactct atcgaatccg aactccttgt ccgttcactc gaaaatcagg 5401 cctaaagatg tgcccggtac tctactgaac atggctttac tgaatctcgg tagtcctgat 5461 cctaatcttc ggactgccgc gtacaatcac ctatgcgcgc tcacagcaac gtttggcttg 5521 aaaatagagg gtcaattgtt ggagacgtcc ggtatctgca taccatcgaa taacactata 5581 tttatcaagc acttgagtga gactttggca gcgaacgatc cgcatctcac gctcgaattt 5641 ctcaaagaat gcatacaagg cttcagagaa tcgaccattg aactgaaaca tttatgcctg 5701 gaatatatga cgccgtggct cagcaatctc gtgcgatttt acaaacccca tgacgaaagc 5761 aagcggcaga aacaagttac agagatcttg gacgatttga ttacgttaac cgttcaggaa 5821 attgaaatgt atccgagtat acaggctaag atctggagca caatcggcat gttgccagaa 5881 ctgatagatg gtgttctcga tatttttctt caacgtagca cacgatatgg cttaggttcg 5941 ccgatggccg agattatggc tgacactgct gttgctctag cgtccggtaa cgtggaactg 6001 gtcgccaaga aagtgattaa taaagtgtgt cgaatagtag acaaaacgtg catgtcgccg 6061 acgacacagt tagaacagca tataatgtgg agcgacatag caatcctagc gagatatctt 6121 ttgatgttat cctttaataa ctgtctggat gtagggaaac atttgccaca tctctttcat 6181 acagtgacgt tgctcttatg ttctggtagt ttgactatgc gagcttccac tcatggttta 6241 gtgatcaaca ttattcattc attatgcaca tgcagttcgc ctgctttttc cgaagataca 6301 cataggatat tacggatgag cttagacgag ttctcattgc ccaagtttta cctattgttc 6361 ggcatcagca aggtgaaatc tgctgctggc acagcctttt acaaacatcc gaactccagc 6421 aataaacccg tgaatgaaaa gtggctcagt agtgatcaaa gaagctcgca cggaacgcag 6481 gacaaggaga gactttattt acccaatttg gaagtcataa ctgacgctct tttggagatt 6541 atagaggctt gcatgcgaga tattccgaaa tgcgattggt taaaaacgtg gacttcgtta 6601 gcgaagaact ttgctttctg cttaaatcca gctttgcagc cgagggctct catcgtcttt 6661 ggttgtatca gcaaaagtat aacggatcaa gatatgaaac aattactgaa gatattgatg 6721 aaggcgctcg aaagttttaa cgatattaat cttatagagg ctattgttat gtgcttaaca 6781 cgattgcaac ctcttctgag acctgaatct ccaatacata gatatttatt ctggattgcc 6841 acatccgttc tagagttaga cgaaacgtcg ttatacgcat ccggtttagc ccttctagag 6901 caaaatttgc atacacttga ttcgcaaggc actttcgacg agaagacact agaacacgta 6961 atgatgtcaa cgcgtgaacc tttggaatct caatttaaac tattggatta caccgtgggc 7021 ttgtccttta agtctaactt tcatttcgcg ctagttggtc atctcttgaa aggctatagg 7081 catcctacac caactacagt caccagaacg gtcagagtat tgaccatgtt actggcaatc 7141 atagctaaac cttccaaaag ggataagttt gaagtaacgc ctgaaagtgt cccttactta 7201 actgcgctag tggccgtgtc agaagaggtt cgtagcaggt gtcacattcg acattcgctc 7261 gacaaaagct tacacgattc atcaggcagt tcagacgttc ttgacacttt accatcgcgc 7321 aatacggaaa tgcctggagc ttctaatcct agaaggcaga aaacttggga tttattggat 7381 caatcagcac ttactcaagc aaaacaacaa aaacaatctg cacagactgg ccggctttta 7441 tttaaatcgc agcgatcttt gagtgtgccg agcgcaaagg acgacaagtc aacggacaac 7501 acagaacaac agagagatcg gagtacgaga gtgagtttaa gcaacgaaaa taacgttttg 7561 ctcgatccgg aagtgttaac agatttttca acacagactt tggtgctgac tatgctggcc 7621 acgctagtaa aatattctac tagcgaaaac gaaacgcgaa ttctttatga gtatttagcg 7681 gaagcaacta tagtttttcc gaaagttttc ccagtcgtat ataacttgct tgatgcgaaa 7741 atcatcagtg tattatcttc ttgtcaagat caagtaatat taagtgcggt acaaacgatt 7801 attcaaaaca tgattgcctg tgaagactca aatcaacatc atttgcaaca ttatttgcaa 7861 acttgcggat ttcggggtct ttggagattc gcaggtcttt atacgaattc taattgtaca 7921 catgagaatg ctgagttgtt tgttaattgc ctgaaagcaa tggtagaaat attggaaaca 7981 tatttgatac aagaatcgaa tagtaaagag gaagttatta tcaggaaaag taaacgggcc 8041 aataattgtc aaacagacaa cacagaatct aaaacaaaat ccaaaacaga atccaaaaca 8101 aaatcatctc cagtccaaga acaaattcgt gtccaagaac aaagcgaaat tgacgttcat 8161 acagatcgta atacggataa caagcgagac gattcagttg atatacgtcg agctgaagat 8221 acgggtggtg atgatggtgg tggccattca cattcttag //