Dbfetch

Dbfetch

LOCUS       XM_012203388            1155 bp    mRNA    linear   INV 02-APR-2015
DEFINITION  PREDICTED: Atta cephalotes beta-1-syntrophin (LOC105621953), mRNA.
ACCESSION   XM_012203388
VERSION     XM_012203388.1
DBLINK      BioProject: PRJNA279976
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Atta cephalotes
  ORGANISM  Atta cephalotes
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
            Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_012130102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Atta cephalotes Annotation Release
                                           100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Atta cephalotes"
                     /mol_type="mRNA"
                     /db_xref="taxon:12957"
                     /chromosome="Unknown"
                     /sex="male"
     gene            1..1155
                     /gene="LOC105621953"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins"
                     /db_xref="GeneID:105621953"
     CDS             1..1155
                     /gene="LOC105621953"
                     /codon_start=1
                     /product="beta-1-syntrophin"
                     /protein_id="XP_012058778.1"
                     /db_xref="GeneID:105621953"
                     /translation="MGMKYLREVTPYFRKASIIQEVGWELQRGFLSATPPPPKSPPRA
                     DTRYLPLQLCRLTRAHPSSDPDGRILELHSPDGVHECWLRAADNTEANVWFNALHSAL
                     AALTLKALRLASALPDPQQLQHIGWLARRHCLQNGRASSESSEDGAGSSASTSRGAGS
                     GFGLAAGCTGGWRSVFGAVSGRELRLYECAPWSPEAWASPSITCPLIATRLVSSPTRQ
                     NEAASSSSGSTQHGATFAVRVGTMDGVVTHHLRAETRRDLAAWARAIVQGCHTAAHSL
                     REYTVRCTWQGKACQLVVNHEEGFALYSAGTRGTAGNGVSPGSPPTPLWRRSFDKLKM
                     SADDGARLLWLDFGGEDGEIELDLESCPKPIVFVLHNFLSAKIHRLGLSA"
ORIGIN      
        1 atgggaatga agtacctgcg ggaagtgacg ccgtacttca ggaaggcttc gatcatccag
       61 gaagtgggct gggaacttca acgcggtttc ctgagcgcga cgccaccgcc gccaaagtca
      121 ccaccacggg cggatactcg ttatctgcca ttacaactct gcagactcac cagagcgcat
      181 ccctcttccg atcccgatgg gcgtatccta gaattacact cacctgatgg tgttcacgaa
      241 tgctggttga gagccgctga caacacggaa gcgaacgtct ggttcaatgc tttgcactcg
      301 gcgttggcag ccctcacctt gaaagcatta cgactggcct cagcacttcc agatcctcag
      361 cagcttcagc acataggctg gttggcgagg agacattgtc ttcagaatgg acgagccagt
      421 agtgagagta gcgaagatgg agccggaagt agtgcaagca cttcgcgagg agccgggagt
      481 ggattcggtc ttgcggctgg atgtaccggc ggatggcgta gtgtttttgg tgcagtttca
      541 ggccgggaac ttagattata tgagtgtgcg ccttggagcc cagaagcttg ggcttcgccg
      601 agcattacct gtccccttat cgcaacacga ctggtctcct ctccaacgcg acagaacgaa
      661 gcagcgagca gcagtagtgg ttcgactcaa cacggggcga cgttcgcggt ccgggttggc
      721 acgatggacg gggtagtcac gcatcattta cgagctgaaa cacgaagaga tctggcggct
      781 tgggcacgag cgatcgttca aggatgtcac acggctgctc attccttgcg agaatacact
      841 gttcgttgca catggcaagg taaggcctgt cagttggttg tcaaccacga agaaggcttc
      901 gcgctttact ccgcaggaac gcggggaact gccgggaacg gcgtaagtcc tggatcacca
      961 cccacgccac tctggagaag atccttcgac aaattgaaaa tgtccgcgga cgacggcgcc
     1021 cgtcttctgt ggctcgattt tggaggcgaa gatggcgaaa ttgaactaga tttggagagt
     1081 tgtccaaaac caatcgtgtt cgtcttgcac aactttcttt cggcgaagat tcatcggctt
     1141 ggtttgagtg catag
//