Dbfetch
LOCUS XM_012202938 3795 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase classes I and II (LOC105621470), mRNA. ACCESSION XM_012202938 VERSION XM_012202938.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq; corrected model. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130098.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-99 ADTU01019315.1 1453-1551 c 100-246 ADTU01019315.1 1016-1162 c 247-518 ADTU01019315.1 162-433 c 519-601 ADTU01019315.1 1-78 c 602-1015 ADTU01019314.1 4212-4625 c 1016-1136 ADTU01019314.1 4007-4127 c 1137-1332 ADTU01019314.1 3724-3919 c 1333-1666 ADTU01019314.1 3299-3632 c 1667-1849 ADTU01019314.1 3038-3220 c 1850-2059 ADTU01019314.1 2740-2949 c 2060-2379 ADTU01019314.1 2350-2669 c 2380-2694 ADTU01019314.1 1949-2263 c 2695-2736 ADTU01019314.1 1805-1846 c 2737-2938 ADTU01019314.1 1543-1744 c 2939-3161 ADTU01019314.1 1237-1459 c 3162-3480 ADTU01019314.1 857-1175 c 3481-3648 ADTU01019314.1 618-785 c 3649-3672 ADTU01019314.1 593-616 c 3673-3795 ADTU01019314.1 396-518 c FEATURES Location/Qualifiers source 1..3795 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..3795 /gene="LOC105621470" /note="The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins" /db_xref="GeneID:105621470" CDS 1..3795 /gene="LOC105621470" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase classes I and II" /protein_id="XP_012058328.1" /db_xref="GeneID:105621470" /translation="MASNKGTGVTMHIKPVEVSEQLQTGEKFIKWDEDSGVATPVTLK VDKYGFYLHWVDQNNEMDMLDIAIIRDTRTGKYAKVPKDPKLKSLVTMGSQDSLEDKT VTICYGSDFVNMNFINFCTTRAEIAQHWSEQLFQMAYNLIQLNTSTTMFLLKAHTKLI LTTDKNEKIPVKNIVKMFAQNKDDRKRVEKALDISGFPSXXNDVVPLLKFQFEDFFNF YKSLTQRSDVEKVFEGIISRRKVMSVSQFVDFLNKSQRDPRLNEILYPYANEARAKDI INQYEPNKCNANKGQLSFDGFLRYLMSEDNPIVAVSKFELSDDMDQSLPHYFINSSHN TYLTGHQLTGRSSVEIYRQCLLSGCRCVELDFWNGKFDEPVIVHGYTFVPEICARDVI EAIAETAFKTSDYPVILSFENHCNPRQQAKIAQYCRDFFGEMLLDAPLESHKLEPGQE LPPPELLKRKIIIKNKKKHHHHHKKHQKKQQQVLDTVEGTTENETNGTANLSAAGENG PPPDIIPQNEMDDVAPENEQQIGNGDIPHLPMLQQRQGSKDSGQDDEDEEDESSTEDD ESNVEDIKLKIGDKGAPDKSAAKETEAGAEISALVNYVQPVHFNSFESAEKKKRMYEM SSFDEKQATTLLKEKPLEFVNYNKHQLSRVYPAGTRFDSSNFMPQVFWNAGCQLVALN YQTLDLAMQLNLGIFEYNKRCGYLLKPEFMRRKDRRLDPFAESTVDGIIAGTVHIHVI SAQFLTDKRVGTYVEVDMYGLPADTVRKKFRTKIVPNNGINPIYDEEPFVFKKVVLPE LASIRIAAYEESGRLIGHRVLPVVGLCPGYRHVALRTECGQPLPLASLFLHVIVKDYV PDGLSELAEALANPIKYQSEVEKRENQLLVLTDYLEEPEEIEDKSKVGDTPSTAKPEE VVKAKRLQSIGELPSLLPTSSSLHSRPSIGGLGSSDTVDVDDDTPCPAVQPVDTSINK SPVNASNISDEIIAESLEKLMENKLVREKKMELEKKLESLRKKHEKEKMRLQSQKASI DGEKHRSKFYMSNRLVKRLSSKTISFSSEVGLSTLTMPETSECPEDTENREGIEGTRG LPRSQSERFLAVCKAHVQQERELQEKYYENLFATVEKVMRASQSNQLKMLQVLLDRET TDVKRKLQATRQGEVKQLAKVHKDKAELERIKREVAKSTVEKGVNECTRLTKIYDKKR TELERQHEEVRQKLEEERAKVKANLLAEYSSRYSKYESGELPLSPSGGASLPESLSEN TY" ORIGIN 1 atggcaagca ataagggtac aggtgtcacc atgcacataa agccggtgga agtttccgag 61 cagctgcaaa ctggagagaa gtttatcaag tgggacgagg attctggggt ggcaacgccg 121 gtcactttga aagtggataa atatggtttt tacttacact gggtggatca aaataatgag 181 atggatatgc tggacatagc aattataaga gatactcgca caggaaaata tgcaaaagta 241 ccaaaggatc caaagctgaa atcgcttgta acgatgggtt ctcaagactc gttagaagat 301 aaaactgtaa caatctgtta tggctctgac tttgtcaata tgaattttat taatttttgc 361 acaacgcgtg cagaaatagc acaacattgg tcagaacaac tttttcaaat ggcgtacaat 421 ttgattcaat taaacactag tacaactatg ttcttattga aagcacatac caagcttata 481 cttactactg ataaaaatga aaagatacca gtaaaaaata tagtaaaaat gttcgcacaa 541 aacaaagatg accgcaagcg tgttgagaaa gcactcgata tttctggctt tccatcnnnn 601 nagaatgacg tcgtgccgtt gttaaaattt caattcgaag atttcttcaa cttttacaag 661 tcactgactc agagatcaga tgtggaaaaa gtgtttgaag gaattattag tagacgtaaa 721 gtaatgtctg tttcgcaatt tgtggacttt ttgaacaagt cgcaaagaga tccgcgcctt 781 aacgagatat tgtatcccta tgcaaatgaa gcaagggcaa aggatattat aaatcaatac 841 gaacctaata aatgtaatgc aaataaaggg caactgagtt ttgacggatt tttgagatat 901 cttatgagtg aagataatcc gattgttgct gtctctaaat ttgaattgtc tgacgatatg 961 gatcaatcgc ttccgcatta ctttataaat tctagtcaca atacatattt aacaggacat 1021 caacttactg gaagaagttc tgtagaaatt tatcgtcaat gtcttctatc tggttgtcga 1081 tgcgttgaat tagatttttg gaatggaaaa tttgacgaac ctgttattgt acatggatac 1141 acattcgtac ctgaaatatg tgctcgagat gtgatagagg caattgctga gaccgctttt 1201 aaaacatctg actacccagt tattctcagt ttcgaaaatc attgcaatcc aaggcagcaa 1261 gccaaaatcg ctcagtactg cagagacttt ttcggggaaa tgttgcttga tgcgccactt 1321 gaatcgcaca agttagagcc tggtcaagaa cttccaccac cggagttact aaagcgcaaa 1381 ataataataa aaaataaaaa gaaacatcac catcatcata aaaagcatca gaaaaagcag 1441 caacaagttt tagatactgt tgaaggtacc acagagaatg aaactaatgg aacggcgaat 1501 ctatctgctg caggagaaaa cggtcctccg ccggatatta tacctcagaa tgaaatggat 1561 gatgtcgcac ctgaaaatga gcagcaaatt ggaaatggcg atattcctca tttgccgatg 1621 ttgcaacaaa gacagggtag taaagacagc ggccaggatg atgaagacga agaagatgaa 1681 tcgagtacgg aggacgatga atctaatgta gaagatataa aactgaaaat aggtgataaa 1741 ggcgcaccag ataaatctgc ggccaaagag acagaggcgg gcgcagaaat ttcagcttta 1801 gttaattatg tgcaacccgt acacttcaat agtttcgaat cggctgaaaa aaaaaaacgt 1861 atgtacgaaa tgtcatcttt tgacgaaaag caagctacga ctcttttgaa agaaaaacca 1921 ttagaatttg tgaattacaa caaacatcaa ctatctaggg tttatccagc aggaacgaga 1981 tttgattcca gtaattttat gccacaagta ttttggaatg cgggatgtca attagttgcg 2041 ttaaattatc aaacactcga tctggcaatg caattaaatc tgggaatatt tgagtataat 2101 aaacgttgcg gttatctatt aaaaccggaa tttatgagaa gaaaagatcg acgattagat 2161 cccttcgctg aatctactgt tgatggtatt atagcaggca cggttcatat ccatgtaata 2221 tccgcacaat ttttaaccga caaaagagta ggaacttacg tggaagtcga catgtacggt 2281 ttaccagcag atactgtaag aaagaaattc cgtacaaaaa ttgtaccgaa taatggtatt 2341 aatcctatat atgacgaaga accgttcgta tttaagaagg tagttttgcc ggaacttgcc 2401 tcgataagga tagcggcgta tgaagaatct ggacgtttaa tcggtcacag ggtacttccc 2461 gtagttggat tatgcccagg atatagacac gtagcattaa gaacagaatg tgggcaaccc 2521 ctaccattag cgagtctgtt tttacacgtt atcgtgaaag attacgttcc tgatggtttg 2581 agtgaacttg ctgaagcttt ggcgaatccc attaaatatc agagtgaagt ggagaagaga 2641 gagaaccaat tattggttct tacagattat ttggaagaac cggaagaaat cgaagataag 2701 agtaaagttg gcgatactcc tagtactgct aaaccagagg aagttgtaaa agctaaacga 2761 ttacagtcca taggcgaatt gccaagtctt ttaccaactt ctagtagctt acatagtaga 2821 ccatctatcg gtggcttagg tagttcagac acagtggatg tggacgatga tactccttgt 2881 cctgcagttc aaccagttga tacgtctata aataaaagcc cagtcaatgc tagcaatata 2941 agtgacgaaa taatagccga aagtttggaa aaactcatgg aaaacaagct ggtcagggag 3001 aaaaagatgg aacttgagaa gaaacttgaa tctctgagga aaaagcatga gaaagaaaaa 3061 atgcggttac agtcgcagaa agcctcgatc gacggcgaga aacatagatc gaaattttat 3121 atgagcaaca ggctggtaaa acgactgtcg agtaaaacta tcagtttttc gagtgaagtg 3181 ggtttaagca ccttgaccat gcctgagact tccgaatgtc cggaggatac ggaaaatcgt 3241 gagggaatcg aaggaaccag aggtttaccc agaagtcaaa gtgaacgatt tttagccgta 3301 tgcaaggcgc atgttcaaca agaacgtgaa ttacaggaaa aatattacga gaatcttttt 3361 gcaactgtcg agaaagtaat gagagcatca caatccaatc aattaaaaat gcttcaggtg 3421 cttctagata gagaaactac agatgttaaa cgaaagctgc aagctacgag acaaggcgag 3481 gtcaaacaat tggccaaggt gcacaaagac aaagccgagt tggaacgtat aaaacgagaa 3541 gttgcaaaat cgaccgtgga gaaaggtgta aacgaatgta cgcgtttaac gaaaatttat 3601 gacaagaaaa gaacggaatt ggaaagacaa catgaagaag tgcggcaaaa actggaagag 3661 gagcgagcca aggtaaaagc taacttgctg gccgagtata gtagccgcta cagcaaatac 3721 gaaagtggtg agttacccct gtcaccgtct ggcggagcta gcttgcccga atcactcagc 3781 gagaatacat attga //