Dbfetch
LOCUS XM_012199406 2934 bp mRNA linear INV 02-APR-2015 DEFINITION PREDICTED: Atta cephalotes ubiquitin carboxyl-terminal hydrolase 8-like (LOC105617861), mRNA. ACCESSION XM_012199406 VERSION XM_012199406.1 DBLINK BioProject: PRJNA279976 KEYWORDS RefSeq; includes ab initio. SOURCE Atta cephalotes ORGANISM Atta cephalotes Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012130078.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Atta cephalotes Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..2934 /organism="Atta cephalotes" /mol_type="mRNA" /db_xref="taxon:12957" /chromosome="Unknown" /sex="male" gene 1..2934 /gene="LOC105617861" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:105617861" CDS 1..2934 /gene="LOC105617861" /codon_start=1 /product="ubiquitin carboxyl-terminal hydrolase 8-like" /protein_id="XP_012054796.1" /db_xref="GeneID:105617861" /translation="MSNLKYTCINDLVQKAKINYTGKEPRFVYQRLPAMRESSDLAKK EGDDEIAYIFLKRWLDSVEWLRRTHSKDGKSAYATNMTVDQINEVKNILADLKQKLEV RYELNLKKCNDKLELMEVEMDESKVPNNDIGLKLPEIPAEDISLSSINDNFISCDKLY NLIQKIRARYLIIDTRQKGHYENSRILSDRCINIPQSEIKKGLLGTHFEKYFANDKHS YDLFVNRSAQHTDILVLLDWNTTQETLTPCIHINLLKDIFEKWDPGIKHKKIKILNGG YQEWWERYPAFTTNPSIEVPEFKIVTLDEKILDTFEYPSWACSDSEDEILKKEEEQET ENKLNNMIGSNNSIDMEMDHGDNKSAISRHARSNSNDTKSKNFISHVTISINNKRSSR SDSVNGKSSVRLESPESPVLTHSKISSKMPQNEVSAKPVIDRSSKPTALKTYDPRCKE VLRFMKELNELAKSKSKLATELLTHEYELYSQRENKYSPSDEKYLRTEIKSLKIKLED MHKMYLKIENEFKTYLKETDTIKFNPTDDREKTNLDFLQREHKEILKNDSDIHKEPLK TDGPSINTGLERSYSSPNLLQLGDRKAPQIDRTSKPHISPRNQNGIGNENIKVSSLSW GNREERMTPIHGTVHPGITGLKNLGNSCYMNSIIQCLSNTTNLAKYFTDNSYADDLNT NNDNMTQGQVVEEVAQVIKALWRGQYKSISPYDLKVAVGQYKLQFESYEQQDSHEFLT FLLDWMHNELKKNVKMPIEITNAEKEWDKAMNSQRSIISDLFFGQLRSTITCSFCKQA STTYETFNSLTMSLSQSNRCTLNDCMEKFVTGQKVSGWKCPKCQTPRDATKKFDFVKL APIVVIHLNRFAESGGWLEKRNTAVDFPLTGFNLKPYLVLENTKAIMSNNIRNYNYTL YAISNHYGTMDGGHYTAFCKNSTQNKWYKYDDQTVTEVSPNQVKSQNTSAYLLFYTSF PNTIM" ORIGIN 1 atgtcaaatt tgaagtatac ctgcatcaat gacctcgtgc aaaaggctaa gatcaattac 61 acaggtaagg agccacgctt cgtgtaccag aggctccctg ctatgcgaga aagttctgat 121 ttggcaaaaa aggaaggaga cgatgagata gcatatatct ttttgaagag atggctagat 181 tcggtcgagt ggttgaggag aactcatagc aaggatggca agtcggccta tgctacgaac 241 atgactgttg atcagataaa tgaagtgaaa aacatacttg cagacttgaa gcaaaagtta 301 gaagtacgtt atgaacttaa tttgaagaag tgcaatgata agctggaact aatggaggta 361 gaaatggatg aatccaaggt gccaaataat gacattggct tgaagttacc agaaatacca 421 gctgaagata taagtctaag tagcattaat gacaatttta tatcatgtga taaattgtat 481 aatctaatac aaaaaatacg tgccagatat ttgatcattg atactaggca gaagggtcat 541 tatgaaaatt ccaggatatt gtccgataga tgtattaaca ttccacaatc tgaaattaaa 601 aaagggctgc taggcactca ctttgaaaaa tatttcgcaa atgataagca ttcttatgac 661 ttatttgtta atcgatcagc acaacacacg gatattctag tcttgctaga ttggaatact 721 acacaagaaa ctttgacacc atgtattcat ataaatctat taaaagatat tttcgagaaa 781 tgggatcccg gtataaaaca taaaaagatt aagattctga atggaggata ccaggaatgg 841 tgggagcgat atccagcatt tacaacgaat cccagcatcg aagtacctga gtttaagatc 901 gttacacttg atgagaagat tctcgatacg tttgaatatc cttcttgggc atgttctgat 961 tcggaagatg aaatcttgaa aaaagaagaa gagcaagaaa cggagaacaa attgaataat 1021 atgatcggct ctaacaatag tatcgacatg gagatggatc atggtgacaa caaatcagcg 1081 atatctagac atgccaggtc aaacagtaat gataccaaat ccaagaattt cattagtcat 1141 gtaacaatat caattaacaa taaacgatcg tctcggagtg acagtgtaaa tgggaaaagt 1201 tcagtccgat tggaaagtcc agaaagccca gtattaactc attctaagat atcaagtaaa 1261 atgccacaaa acgaagtgag cgcgaaaccg gtgattgatc gtagcagtaa accaaccgcc 1321 ttgaagacat acgatccacg atgtaaagaa gtattaaggt ttatgaaaga gttaaatgaa 1381 cttgcaaaat cgaaatccaa gcttgcgact gagttgttga cccacgaata tgagctttat 1441 tcgcaacgtg agaacaagta cagtcccagt gacgagaaat atctacgaac agaaataaag 1501 tctctaaaaa ttaaattaga agatatgcat aaaatgtacc taaaaatcga aaatgaattt 1561 aagacatatt taaaggaaac ggatacaatt aaatttaatc ccactgatga ccgtgagaag 1621 acgaatctag atttcttgca aagagagcac aaggagatat tgaaaaacga cagtgacatt 1681 cacaaggaac ccttgaagac agatggacca tccattaaca ctggcttgga gcgttcttat 1741 tcgagtccaa atctgttaca gttgggagat cgtaaagcac ctcagataga tagaacttct 1801 aagccacata tttcgcctcg aaatcagaat ggaattggga atgagaacat caaagtgtct 1861 tctcttagtt gggggaatcg ggaggaacga atgaccccta ttcacggcac tgttcatcca 1921 ggtataaccg ggctgaagaa tttgggcaat tcttgttata tgaacagcat cattcagtgc 1981 ctaagtaata ctacgaactt agcgaaatat tttactgata attcatatgc tgatgatctc 2041 aatacgaata atgacaatat gacacaaggc caagtggtgg aagaagtggc tcaagtaatt 2101 aaagcgctat ggagaggcca gtacaagagc atatctcctt acgacctaaa ggttgcagtt 2161 ggacaataca aattacaatt tgaaagttac gaacaacaag actcccatga attcctcacg 2221 ttcctattag actggatgca taatgaactt aaaaagaacg tgaaaatgcc gattgaaata 2281 actaatgcgg agaaagaatg ggacaaagca atgaattctc agagatctat aatatcggac 2341 ttattttttg ggcaattaag atccaccatt acatgttcat tttgcaaaca agcgagtact 2401 acgtacgaaa catttaatag tttaacaatg tctttatctc aatccaatcg gtgcacttta 2461 aatgattgta tggagaagtt tgtgacagga cagaaagtga gcggatggaa atgtcctaag 2521 tgtcagacac ctcgcgacgc gacgaaaaaa ttcgatttcg tcaaacttgc acccattgtc 2581 gtgattcact tgaaccgttt cgctgagagt ggcggatggt tagaaaagcg caacaccgct 2641 gtcgattttc ctctcacggg atttaacttg aagccatacc ttgtcttgga gaacacgaag 2701 gcgattatgt cgaataatat ccgtaattat aattacactc tctatgcgat atcaaatcat 2761 tatggaacaa tggacggtgg tcactacaca gcattttgca aaaactctac tcaaaataaa 2821 tggtacaagt acgatgatca aactgtcacg gaagtatcac cgaaccaagt aaagtctcaa 2881 aacacgagtg cctatttatt gttttataca tcatttccaa acacgatcat gtaa //