Dbfetch

Dbfetch

LOCUS       XM_012199184            1569 bp    mRNA    linear   INV 02-APR-2015
DEFINITION  PREDICTED: Atta cephalotes apoptosis inhibitor 5 homolog
            (LOC105617629), mRNA.
ACCESSION   XM_012199184
VERSION     XM_012199184.1
DBLINK      BioProject: PRJNA279976
KEYWORDS    RefSeq; corrected model.
SOURCE      Atta cephalotes
  ORGANISM  Atta cephalotes
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
            Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_012130077.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Atta cephalotes Annotation Release
                                           100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 3 genomic stop codon
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Atta cephalotes"
                     /mol_type="mRNA"
                     /db_xref="taxon:12957"
                     /chromosome="Unknown"
                     /sex="male"
     gene            1..1569
                     /gene="LOC105617629"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 Proteins"
                     /db_xref="GeneID:105617629"
     CDS             4..1569
                     /gene="LOC105617629"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 3 bases at 3
                     genomic stop codons"
                     /codon_start=1
                     /transl_except=(pos:847..849,aa:OTHER)
                     /transl_except=(pos:850..852,aa:OTHER)
                     /transl_except=(pos:943..945,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: apoptosis inhibitor 5
                     homolog"
                     /protein_id="XP_012054574.1"
                     /db_xref="GeneID:105617629"
                     /translation="MSTDSIEKLYRNFGILADAKDKLVQHEKEYLEILTAVKGSPKEK
                     RLASQFIARFFKHFPKLADQAIDAHLDLCEDEDMAIRKQAIKDLPALCKDNKEHTARI
                     ADILAQLLQAEDPSELAVVHNSIMSLMKSDPKGTLSGFFSQIISGDDGTRERCIKFLA
                     IKLKAIGHDIITKEPEDLLIVECKKVLQDVTADEFHSIMEILAWTRLGSTITGQQELV
                     DITIEQAELSVPFKHTNVEQWNRLVQCVKHALPFFSVCIYIYIYIYTHTHTHTHFDNI
                     FLCVSXXSNVRILLIKIIKFYQISKSLLIIHYSLYLFXTYMPLPPATEITDVPKLQFS
                     HVECLMYAFHKLCKQTPEFLIKDAEQLKEFRLRLQYFARGIQGYIKKLREAISGKTEE
                     ELKSEENQLKVVALKTTNNINTLIKDLFHSPPSFKSIIHLSWKTPCNDKKSDKNSAQK
                     RHTPITFGNDNSPNKRSKEDKNSKREIYTPPSGKYSSTISNYGRGRFKSNRSRGRGGF
                     RTRGRGSWRKNFY"
ORIGIN      
        1 ataatgagta ccgacagtat tgaaaagctg tataggaact ttggcattct tgctgacgcc
       61 aaagataaac tggtacaaca tgaaaaggaa tatttagaaa ttctgacggc agttaaagga
      121 tcgcctaagg aaaaacggct agcatcgcaa tttattgcaa gattcttcaa acatttccca
      181 aagttagcag atcaagctat agacgctcat ttagatttat gcgaagatga agatatggct
      241 attcgaaaac aagctattaa agatttacca gcactttgta aagacaataa agaacataca
      301 gcacgaattg cagatatctt agcacaatta ttacaagctg aggatccttc agaattggca
      361 gttgtacata acagtattat gtcacttatg aaaagtgatc ctaaaggtac cttaagtgga
      421 ttttttagcc aaattattag tggcgacgat gggacgagag aacgttgtat aaaattccta
      481 gctatcaaac ttaaagcaat aggacatgac attatcacga aggaaccgga agacttgcta
      541 attgtagaat gtaaaaaagt attgcaggat gtgactgctg atgaattcca cagtattatg
      601 gaaattcttg cgtggactag attgggatct actatcactg gacaacaaga attagttgat
      661 attacgatag aacaagctga actatctgta ccttttaagc ataccaatgt cgaacaatgg
      721 aacagattgg ttcaatgtgt taaacatgct cttccattct tcagtgtatg tatatatata
      781 tatatatata tatacacaca cacacacaca cacacacatt ttgacaatat atttttgtgt
      841 gtatcataat aatctaatgt tcgtattttg ttgatcaaaa ttatcaaatt ttatcaaata
      901 tcgaaatcat tgcttattat tcattattca ttatatttat tttagactta tatgccactt
      961 cctccagcta cagaaattac agatgtacca aagttacaat ttagtcatgt ggaatgttta
     1021 atgtacgcct ttcataagtt gtgtaaacaa actcctgaat ttttgataaa ggatgcagag
     1081 cagctcaaag aatttcggtt aagattacaa tattttgcaa gaggtattca aggttatata
     1141 aagaaattac gtgaagctat tagcggaaaa acagaagaag aactgaaatc tgaagaaaat
     1201 caattaaaag ttgtggcatt aaaaacaacc aacaatatca atactttaat caaagatctg
     1261 tttcattcac ctcctagctt taaaagtata atacatctct cgtggaaaac accttgtaac
     1321 gacaaaaaga gcgataaaaa ttctgcccaa aaaagacata caccaatcac atttggaaat
     1381 gacaatagtc cgaacaaacg tagtaaggaa gataaaaaca gcaaaagaga aatatatacg
     1441 cctcccagtg gcaaatacag ttcaaccata tcaaattacg gtcgtggtag atttaaaagt
     1501 aacagatcta gaggaagagg tggattcaga acgagaggtc gtggttcatg gcgaaagaat
     1561 ttttattaa
//