Dbfetch
LOCUS XM_006356044 3674 bp mRNA linear PLN 04-APR-2025 DEFINITION PREDICTED: Solanum tuberosum putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 (LOC102588387), mRNA. ACCESSION XM_006356044 VERSION XM_006356044.2 DBLINK BioProject: PRJNA225997 KEYWORDS RefSeq. SOURCE Solanum tuberosum (potato) ORGANISM Solanum tuberosum Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006239139.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jan 5, 2016 this sequence version replaced XM_006356044.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_000226075.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/03/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3674 /organism="Solanum tuberosum" /mol_type="mRNA" /cultivar="DM 1-3 516 R44" /db_xref="taxon:4113" /chromosome="Unknown" gene 1..3674 /gene="LOC102588387" /note="putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns" /db_xref="GeneID:102588387" CDS 34..3450 /gene="LOC102588387" /codon_start=1 /product="putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3" /protein_id="XP_006356106.1" /db_xref="GeneID:102588387" /translation="MEMEANVEENEKNIKMIRSIIGSEIPENEILEALSQKNNNPEAA INHLLDSSTPLIVHKTVTGTGVRISAPIKQENGEESLGCNTVSGLKVREETDLGVNEK GERKVFDGCGAKGSVGNGLKVKEEYDVGVEEKGQKEEEKKVFNVRDFRKDFNEWLKLP ENNPQIDIQKPKEEKKLEMVKFKEEPVLGVEPLSSRPLSKHEYNRLNSSTSNRAIGGI KEKIGIEKNSLSTVVIEDGDFPEDSDWLLVGRTVVTGLSTTKGRKLENNEIVHFSFPQ LGSSNQSSHWGGSRAAIAAASSIVRFSTKRSGEIGRLPMEWAKCLIPLVNSSKVKVFG RCVAAPVNLSLMQELVLYVSFYIHHSVFTSCEKSSWRLDSPSQIDTTTYPLLTLFKLL KVKPFQNAEFTPDELDSRKRQLNLDSDSNEAASVLSIAKRRKGCQQYSEPNKDEQEIS EASINKLVGSVDMYDLKEMEAPDTLMCSLRPYQKEALYWMSESEKGAGVEEASKTLHP CWAAYRICEERKIYVNIFSGEATTEFPTASNAARGGILADAMGLGKTVMTISLILANL GRGSPDDQEIALEDTDETECVTKRITYTDTEVSKKAKGGTLIVCPMALLGQWKDELEA HSKPGSVSVFVHYGGDRSNDPRVIAEQDVVLTTYGVLSATYKANNMKSIFHNVDWYRV VLDEAHTIKSWKTLGAQAAFTLSAHCRWCLTGTPLQNNLEDLYSLLCFLHVEPWCNWA WWNKLIQRPYENGDQRALKLIKAILRPLMLRRTKDTKDKDGRAILILPPTDIQVIQCT QSEAERDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRSD NQEFADLDKLARRFLETNPDSSTQKAPTPAYVEEVVEGIRNGENTECPICLESADDPV LTPCAHRMCRECLLSSWRTPASGLCPICRQMLKKHELFTCPSTNRFRVDVEKNWQVSS KVSKLMDCLEPIRKSGEKSIVFSQWTSFLDLLEIPLKRKQIGYLRFDGKLSQKQRERV LKEFSETNEKTILLMSLRAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKK TVRVRRFIVEDTVEERMQQVQARKQRMIAGALTDEEVRSARIEELKMLFR" ORIGIN 1 attcattctc tcaatttttt tccctgcaaa ttaatggaaa tggaagcaaa tgttgaagag 61 aatgagaaga atatcaagat gatccgttca ataataggtt ctgaaattcc agaaaatgaa 121 attctcgaag ccctttcaca gaaaaacaac aatccagaag cagctattaa ccatttgcta 181 gattcttcga cgccgttgat agttcacaag actgttacgg gcacaggggt aaggatttct 241 gctccgataa aacaagagaa tggagaagaa tcattgggtt gtaatactgt aagtgggtta 301 aaagttaggg aagaaaccga tttgggtgtc aatgaaaagg gggaaagaaa ggtttttgat 361 gggtgtggag caaaagggtc ggttggtaat gggctaaaag ttaaagaaga atacgatgtg 421 ggtgttgagg aaaaagggca aaaagaggaa gaaaagaagg ttttcaatgt gcgggatttt 481 agaaaagact tcaatgaatg gcttaagttg cctgaaaaca acccgcaaat cgatattcag 541 aaaccgaaag aagaaaagaa acttgaaatg gttaagttca aagaagaacc tgtacttggt 601 gttgaaccat tgtcatcaag gcctttgtca aaacacgaat acaacagact gaatagtagt 661 actagtaata gggctattgg gggaattaaa gaaaagatcg gaattgagaa aaatagtctt 721 agtactgttg tgattgagga tggggatttc cctgaagatt ctgattggtt gttagttggg 781 agaactgttg ttactggact ttcaactaca aagggaagaa aactggagaa taatgagatt 841 gttcattttt catttcctca gcttgggagt agtaatcaga gttcacactg gggtgggtca 901 agagctgcta ttgctgctgc atcatccatt gttaggttct cgactaaacg atcgggggag 961 attgggcgtc ttccaatgga atgggcaaaa tgcctcattc cacttgtaaa ttcttcaaag 1021 gtaaaggttt ttggtcgatg tgttgctgca cctgtaaatc tgtccctaat gcaggagctt 1081 gtgttgtatg taagtttcta cattcaccac tcggtgttta caagctgtga gaagtcatca 1141 tggaggctgg attctccctc acaaattgat actacaacat atccactact tacattgttc 1201 aagttgctca aagtcaaacc ctttcagaat gctgagttca ccccagatga gcttgattct 1261 cgtaaacgcc agctcaattt agattctgat tcaaatgagg ctgcttcagt gttatcaatt 1321 gcaaaacgaa gaaagggctg ccaacagtat tcagagccaa acaaggatga gcaagaaatc 1381 tctgaagcat ctattaacaa acttgttggt tctgtagaca tgtatgactt gaaggagatg 1441 gaggctcccg acacacttat gtgcagccta aggccttacc agaaggaggc tctttactgg 1501 atgtcagaat cagagaaagg agctggtgta gaggaagcat caaaaactct tcatccatgt 1561 tgggcagcat atcggatatg tgaagagagg aaaatatatg tcaacatttt ctctggggaa 1621 gcaactactg aattcccaac tgcatcaaac gcagcacgcg gagggatatt ggcagatgca 1681 atggggcttg gaaagacggt gatgacaatt tctctaatac ttgcgaatct ggggaggggt 1741 agccctgatg atcaggaaat tgccttggaa gacacagatg aaactgaatg tgtaacaaaa 1801 agaatcactt atactgatac cgaagtctca aaaaaagcaa aaggtggcac tctcattgtc 1861 tgtcctatgg cattactagg ccagtggaag gatgaacttg aagcacattc aaagcctggt 1921 agtgtttcag tttttgttca ttatggtggg gacagaagta atgatcctag agtgatagca 1981 gaacaagatg tagtcctgac aacttatggt gtcttgagtg caacttataa ggctaataat 2041 atgaaaagca tatttcataa tgttgattgg taccgggtgg ttctggatga ggcacacacc 2101 ataaaatcct ggaagactct tggtgcacag gctgctttta ctttgtcagc acattgtagg 2161 tggtgtctta ctggtactcc tctgcagaat aatttggaag atctttacag ccttttatgt 2221 ttcttgcatg tcgagccatg gtgcaactgg gcatggtgga acaagttaat acagagacct 2281 tatgaaaatg gtgatcagag agctctaaaa ttgatcaagg ccattttgag gcccctgatg 2341 ttgaggagaa caaaggatac caaggacaaa gatggaaggg cgattcttat tctccctcca 2401 accgacattc aagtcattca gtgtacacaa tcagaagctg aacgtgactt ctatgatgcc 2461 ctcttcaaga gatctaaagt tcaatttgat cagtttgtgg cacaaggaaa agttcttcac 2521 aactatgcta atattcttga attactactt cgactgaggc agtgttgcaa ccatcctttc 2581 cttgtgatga gccgaagtga taatcaagaa tttgcagatt tagacaaact agcaagaagg 2641 ttcttggaaa caaatcctga ttcatcaaca cagaaagcac ctacaccagc atatgtagaa 2701 gaagttgttg agggaattcg aaatggagaa aatacggagt gtcccatatg ccttgagtca 2761 gcagatgacc ctgtgctaac accatgtgcc cacagaatgt gcagagaatg ccttctttca 2821 agctggagaa ctccagcaag tggactttgc ccaatttgca ggcaaatgct aaagaaacat 2881 gagctattca catgtccttc tacaaatcgg tttcgagttg atgttgagaa gaactggcaa 2941 gtatcttcta aagtttcaaa gctgatggat tgcttagaac ctataagaaa atctggtgaa 3001 aaaagcattg tttttagcca atggacttca tttcttgatc ttttggaaat cccactcaaa 3061 agaaagcaaa ttggctactt gaggtttgat gggaaattgt cacagaaaca aagagaaagg 3121 gtcttgaaag agttcagtga gactaatgaa aaaacaattt tgttaatgtc actaagagct 3181 ggaggtgttg gcttgaactt aacagcagct tctaatgtct ttctcatgga tccatggtgg 3241 aatcctgctg ttgaagaaca agcaattatg agaattcatc gtattggtca aaagaaaaca 3301 gttcgtgtta gaaggttcat tgttgaggac acagtggaag aaagaatgca acaagtccaa 3361 gcaagaaagc aaaggatgat agctggagct ttgactgatg aagaagtgag gtctgctaga 3421 attgaagaac tcaagatgct tttcagataa ttgattttaa tatatttgga aaagtccatt 3481 tatatttaat tggatgtaaa attagtgaaa aaaaacaaga aatttatgtc caaggggtgg 3541 ataaaattgt ttttgtatag ttacaattgt tccacctgaa ttttgtaaag tatttttgaa 3601 gtaacaaact aagttatgat cttgttgtct atgcttattg catatttgaa ttagatgtaa 3661 ttaatgggat gtaa //