Dbfetch
LOCUS XM_006351254 1948 bp mRNA linear PLN 04-APR-2025 DEFINITION PREDICTED: Solanum tuberosum U3 small nucleolar RNA-associated protein 18 homolog (LOC102587394), mRNA. ACCESSION XM_006351254 VERSION XM_006351254.2 DBLINK BioProject: PRJNA225997 KEYWORDS RefSeq. SOURCE Solanum tuberosum (potato) ORGANISM Solanum tuberosum Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006239057.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 5, 2016 this sequence version replaced XM_006351254.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_000226075.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/03/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1948 /organism="Solanum tuberosum" /mol_type="mRNA" /cultivar="DM 1-3 516 R44" /db_xref="taxon:4113" /chromosome="Unknown" gene 1..1948 /gene="LOC102587394" /note="U3 small nucleolar RNA-associated protein 18 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns" /db_xref="GeneID:102587394" CDS 111..1778 /gene="LOC102587394" /codon_start=1 /product="U3 small nucleolar RNA-associated protein 18 homolog" /protein_id="XP_006351316.1" /db_xref="GeneID:102587394" /translation="MASLISQNITHSIGDEKSKRKTKGEGKEESEKKINRKRKKEHNE ENKEVEIKDKREMEKLENLLFGSLYNPVGFGKDDEDEKRDDGGNESAMFFVDRVADSA LSVYEGDAQLVQEGIVEVEKERKPVWVDDEEEKASIKIASVNRLRKLRKEEGEDVVSG STYVERLRAQHAKLNPGTEWAQIDYQSRNYSSDDEDSDEEGKHIDDYGSKDVKLVDDI LQSNEDLVVKSRTKLLPGLLEYSRLVDANAVDPSNAPINSVQFHKNSQLLLVGGLDKK LRFFQIDGKRNTKIQSIFLEDFPIKKASFLPNGSQVIISGRRKFFHVLDLVKASVDKV GPLVGREEKSLESFEVSPDSDTIAFLGNEGYILLVSTKTKELIGTLKMNGTVRSAAFS DDGQQLLSSGGDGHIYHWDLRTRTCIHKGVDEGSINGTALCTSPNGSLFASGSDSGIV NIYNKQEFLGGKRRPIKAIENLTTKVDFMKFNHDAQILAISSGMKKNSSKLIHIPSFT VFSNWPSPNRAVHYPRCLDFSPHGGFMALGNAAGKVLLYKLHHYHDA" ORIGIN 1 ccctctataa ttgtttgccc tagtttcatt taattcctcc aagaactctc gttcctcagt 61 aaaacaaaaa gaagcaaaac acctcgtttc agtgatagga tatttgggaa atggccagct 121 taatatcaca gaatattact cattcgatag gggatgaaaa gtctaaaagg aagactaaag 181 gtgaaggtaa ggaagaaagt gagaaaaaaa ttaataggaa gagaaagaaa gagcacaatg 241 aagagaataa agaagtagaa atcaaggata agagggaaat ggagaagctt gagaacttat 301 tgtttggatc attgtataac cctgttggtt tcgggaagga tgatgaagat gaaaagcgag 361 atgatggcgg aaatgagtct gctatgttct ttgtggaccg ggttgctgat agtgcattgt 421 ctgtttatga gggagatgca cagctggtgc aagaaggtat cgtagaagtg gagaaagagc 481 ggaaacctgt gtgggtagat gatgaagaag agaaggctag tataaaaata gcaagtgtga 541 acagattgag gaagctgagg aaagaagagg gcgaagatgt ggtatctggt tctacgtacg 601 tggaaagact aagggctcaa catgctaaac ttaatccagg cactgaatgg gcccaaattg 661 attatcaaag cagaaactac agttctgatg atgaagattc tgacgaggaa ggtaaacata 721 ttgatgacta tggttccaag gatgtcaagt tggtggatga tattcttcaa tcaaacgaag 781 atcttgttgt caaaagtcgc acgaaattgt tgccggggct tcttgaatat tcaagactgg 841 ttgatgctaa tgcagttgat ccttcaaatg caccgataaa ttctgttcag ttccacaaga 901 attctcagtt gctccttgtt ggtggattgg ataaaaaact cagatttttc cagattgacg 961 ggaaacgaaa tacgaagatc caaagcatct ttcttgaaga ctttccaatt aaaaaggctt 1021 ctttcttacc caatgggtct caagttatta tatcaggaag aaggaagttc ttccatgtct 1081 tagacttggt caaagcaagt gtagataaag taggtcctct agtcggcagg gaagaaaaga 1141 gcctggaaag ttttgaggta tctcctgatt cagatacaat tgcttttctt ggtaatgaag 1201 gatatatttt gctagtttcc accaaaacaa aggagctcat tgggacacta aaaatgaatg 1261 gaactgtccg ctcagcggca ttctctgatg acggacaaca attactgagc tctggtggag 1321 atggccatat ttaccattgg gatttgagga caaggacttg cattcacaaa ggtgttgatg 1381 aagggtccat aaatggtact gctctttgca cttcgccaaa tggaagtttg tttgcttctg 1441 gttcagacag tgggatcgta aatatttata acaaacaaga gtttttaggg ggaaagagaa 1501 gaccaatcaa ggcaattgag aatctgacca cgaaagtgga ttttatgaag tttaatcatg 1561 atgctcaaat attagccatc agttctggca tgaagaaaaa tagctcaaag ctaattcaca 1621 ttccatcatt tacagttttt tcaaactggc cctctccaaa tcgggctgtc cactatcctc 1681 gctgcttgga ttttagtcct cacggaggat tcatggctct gggaaatgct gcaggaaaag 1741 tgttattgta caagttgcat cattaccatg atgcatagtt agtttggata cagttggcat 1801 tatgagccac aaatgttttt gttagtgtag tatgagacat tcaaaggcat gctttatttt 1861 ttcctccttt taagttttct gatgtaacag tattttccaa tgtatggcaa gatgatttgg 1921 taaaggactt tctcctcttt acttttta //